Allen Brain Atlas

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Dkk3 ISH: Mus musculus, Male, P56, sagittal dickkopf homolog 3 (Xenopus laevis), entrez_id: 50781, Experiment: 69117401, C57BL/6J Studies: Developing Mouse Brain, Mouse Brain
Inpp1 ISH: Mus musculus, Male, P56, coronal inositol polyphosphate-1-phosphatase, entrez_id: 16329, Experiment: 67870434, C57BL/6J Studies: Developing Mouse Brain, Mouse Brain
Fxyd6 ISH: Mus musculus, Male, P56, sagittal FXYD domain-containing ion transport regulator 6, entrez_id: 59095, Experiment: 69113656, C57BL/6J Studies: Developing Mouse Brain, Mouse Brain
Crtac1 ISH: Mus musculus, Male, P56, sagittal cartilage acidic protein 1, entrez_id: 72832, Experiment: 69173998, C57BL/6J Studies: Developing Mouse Brain, Mouse Brain
Chrna5 ISH: Mus musculus, Male, P56, coronal "cholinergic receptor, nicotinic, alpha polypeptide 5", entrez_id: 110835, Experiment: 75826567, C57BL/6J Studies: Developing Mouse Brain, Mouse Brain
Top1 ISH: Mus musculus, Male, P56, coronal topoisomerase (DNA) I, entrez_id: 21969, Experiment: 74957897, C57BL/6J Studies: Developing Mouse Brain, Mouse Brain
Tcf20 ISH: Mus musculus, Male, P56, sagittal transcription factor 20, entrez_id: 21411, Experiment: 70598360, C57BL/6J Studies: Developing Mouse Brain, Mouse Brain
Galr2 ISH: Mus musculus, Male, P56, coronal galanin receptor 2, entrez_id: 14428, Experiment: 80517343, C57BL/6J Studies: Developing Mouse Brain, Mouse Brain
Zfp189 ISH: Mus musculus, Male, P56, sagittal zinc finger protein 189, entrez_id: 230162, Experiment: 76098386, C57BL/6J Studies: Developing Mouse Brain, Mouse Brain
Grin1 ISH: Mus musculus, Male, P56, coronal Grin1, Experiment: 532, C57BL/6J, Failed QC Studies: Developing Mouse Brain, Mouse Brain
Evi5 ISH: Mus musculus, Male, P56, sagittal ecotropic viral integration site 5, entrez_id: 14020, Experiment: 74076096, C57BL/6J, Failed QC Studies: Developing Mouse Brain, Mouse Brain
Zfp263 ISH: Mus musculus, Male, P56, sagittal zinc finger protein 263, entrez_id: 74120, Experiment: 68667204, C57BL/6J Studies: Developing Mouse Brain, Mouse Brain
Lyz2 ISH: Mus musculus, Male, P56, sagittal lysozyme 2, entrez_id: 17105, Experiment: 77923163, C57BL/6J, Failed QC Studies: Developing Mouse Brain, Mouse Brain
Crhr1 ISH: Mus musculus, Male, P56, sagittal Crhr1, Experiment: 298, C57BL/6J Studies: Developing Mouse Brain, Mouse Brain
Inhbe ISH: Mus musculus, Male, P56, sagittal inhibin beta E, entrez_id: 16326, Experiment: 80341111, C57BL/6J Studies: Developing Mouse Brain, Mouse Brain
Rasa2 ISH: Mus musculus, Male, P56, sagittal RAS p21 protein activator 2, entrez_id: 114713, Experiment: 71808394, C57BL/6J Studies: Developing Mouse Brain, Mouse Brain
Calb2 ISH: Mus musculus, Male, P56, sagittal calbindin 2, entrez_id: 12308, Experiment: 75457438, C57BL/6J Studies: Developing Mouse Brain, Mouse Brain
Anxa2 ISH: Mus musculus, Male, P56, sagittal annexin A2, entrez_id: 12306, Experiment: 72182977, C57BL/6J Studies: Developing Mouse Brain, Mouse Brain
Adra2a ISH: Mus musculus, Male, P56, sagittal "adrenergic receptor, alpha 2a", entrez_id: 11551, Experiment: 70723343, C57BL/6J Studies: Developing Mouse Brain, Mouse Brain
Cdk5 ISH: Mus musculus, Male, P56, sagittal Cdk5, Experiment: 245, C57BL/6J Studies: Developing Mouse Brain, Mouse Brain
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Dkk3 ISH: Mus musculus, Male, P56, sagittal

dickkopf homolog 3 (Xenopus laevis), entrez_id: 50781, Experiment: 69117401, C57BL/6J

Studies: Developing Mouse Brain, Mouse Brain

Inpp1 ISH: Mus musculus, Male, P56, coronal

inositol polyphosphate-1-phosphatase, entrez_id: 16329, Experiment: 67870434, C57BL/6J

Studies: Developing Mouse Brain, Mouse Brain

Fxyd6 ISH: Mus musculus, Male, P56, sagittal

FXYD domain-containing ion transport regulator 6, entrez_id: 59095, Experiment: 69113656, C57BL/6J

Studies: Developing Mouse Brain, Mouse Brain

Crtac1 ISH: Mus musculus, Male, P56, sagittal

cartilage acidic protein 1, entrez_id: 72832, Experiment: 69173998, C57BL/6J

Studies: Developing Mouse Brain, Mouse Brain

Chrna5 ISH: Mus musculus, Male, P56, coronal

"cholinergic receptor, nicotinic, alpha polypeptide 5", entrez_id: 110835, Experiment: 75826567, C57BL/6J

Studies: Developing Mouse Brain, Mouse Brain

Top1 ISH: Mus musculus, Male, P56, coronal

topoisomerase (DNA) I, entrez_id: 21969, Experiment: 74957897, C57BL/6J

Studies: Developing Mouse Brain, Mouse Brain

Tcf20 ISH: Mus musculus, Male, P56, sagittal

transcription factor 20, entrez_id: 21411, Experiment: 70598360, C57BL/6J

Studies: Developing Mouse Brain, Mouse Brain

Galr2 ISH: Mus musculus, Male, P56, coronal

galanin receptor 2, entrez_id: 14428, Experiment: 80517343, C57BL/6J

Studies: Developing Mouse Brain, Mouse Brain

Zfp189 ISH: Mus musculus, Male, P56, sagittal

zinc finger protein 189, entrez_id: 230162, Experiment: 76098386, C57BL/6J

Studies: Developing Mouse Brain, Mouse Brain

Grin1 ISH: Mus musculus, Male, P56, coronal

Grin1, Experiment: 532, C57BL/6J, Failed QC

Studies: Developing Mouse Brain, Mouse Brain

Evi5 ISH: Mus musculus, Male, P56, sagittal

ecotropic viral integration site 5, entrez_id: 14020, Experiment: 74076096, C57BL/6J, Failed QC

Studies: Developing Mouse Brain, Mouse Brain

Zfp263 ISH: Mus musculus, Male, P56, sagittal

zinc finger protein 263, entrez_id: 74120, Experiment: 68667204, C57BL/6J

Studies: Developing Mouse Brain, Mouse Brain

Lyz2 ISH: Mus musculus, Male, P56, sagittal

lysozyme 2, entrez_id: 17105, Experiment: 77923163, C57BL/6J, Failed QC

Studies: Developing Mouse Brain, Mouse Brain

Crhr1 ISH: Mus musculus, Male, P56, sagittal

Crhr1, Experiment: 298, C57BL/6J

Studies: Developing Mouse Brain, Mouse Brain

Inhbe ISH: Mus musculus, Male, P56, sagittal

inhibin beta E, entrez_id: 16326, Experiment: 80341111, C57BL/6J

Studies: Developing Mouse Brain, Mouse Brain

Rasa2 ISH: Mus musculus, Male, P56, sagittal

RAS p21 protein activator 2, entrez_id: 114713, Experiment: 71808394, C57BL/6J

Studies: Developing Mouse Brain, Mouse Brain

Calb2 ISH: Mus musculus, Male, P56, sagittal

calbindin 2, entrez_id: 12308, Experiment: 75457438, C57BL/6J

Studies: Developing Mouse Brain, Mouse Brain

Anxa2 ISH: Mus musculus, Male, P56, sagittal

annexin A2, entrez_id: 12306, Experiment: 72182977, C57BL/6J

Studies: Developing Mouse Brain, Mouse Brain

Adra2a ISH: Mus musculus, Male, P56, sagittal

"adrenergic receptor, alpha 2a", entrez_id: 11551, Experiment: 70723343, C57BL/6J

Studies: Developing Mouse Brain, Mouse Brain

Cdk5 ISH: Mus musculus, Male, P56, sagittal

Cdk5, Experiment: 245, C57BL/6J

Studies: Developing Mouse Brain, Mouse Brain

	Prenatal (9896)
	Juvenile (57411)
	Adult (116514)
	Aged (32659)

	FISH (300)
	ISH (137378)
	Microarray (290)
	RNA Sequencing (26216)
	Resource (5)

	Aging Dementia TBI - ISH data (1570)
	Aging Dementia TBI - non-ISH data (109)
	Developing Human Brain ISH (3941)
	Developing Human Prenatal LMD Microarray (243)
	Developing Human Reference Data (163)
	Developing Human Transcriptome (285)
	Developing Mouse Brain (21463)
	Glioblastoma (20203)
	Human Brain ISH Autism Study (528)
	Human Brain ISH Cortex Study (6670)
	Human Brain ISH Neurotransmitter Study (11670)
	Human Brain ISH Schizophrenia Study (3378)
	Human Brain ISH SubCortex Study (462)
	Human Brain Microarray (88)
	Human Glioblastoma RNASeq (26085)
	Mouse Brain (28886)
	Mouse Brain Reference Data (1)
	Mouse Cell Types - transcriptomics data (112)
	Mouse Connectivity Projection (1)
	Mouse Connectivity Transgenic Characterization (1850)
	Mouse Spinal Cord (36698)
	Mouse Strains (1080)
	Non-Human Primate ISH (3057)
	Non-Human Primate Macrodissection Microarray (65)
	Non-Human Primate Microdissection Microarray (82)
	Non-Human Primate Molecular Map (133)
	Sleep (1727)

	129/SvJ (10)
	129S1/SvlmJ (124)
	B6.129 (374)
	B6.129.FVB (39)
	B6.C3H (17)
	B6.FVB (35)
	B6.FVB(ICR) (37)
	B6;CFW (2)
	B6;ICR (2)
	C57BL/6J (85098)
	CAST/EiJ (124)
	DBA/2J (124)
	FVB (23)
	FVB.CD1(ICR) (14)
	FVB/NJ (8)
	PWD/PhJ (93)
	SPRET/EiJ (124)
	WSB/EiJ (93)
	ai2/thcre (1)
	ctgf-cre (2)
	wfs1-creer (2)

	Asian (339)
	Black or African American (8233)
	European (122)
	Hispanic (4125)
	Two or more races (122)
	White or Caucasian (14290)

	Dorsal to Ventral (1096)
	Lateral to Medial (3332)
	Medial to Lateral (5219)
	Ventral to Dorsal (7134)
	coronal (27597)
	sagittal (43609)
	variable (38372)

	autism (258)
	control (26146)
	glioblastoma (32400)
	schizophrenia (1231)
	traumatic brain injury (762)

	Amygdala/Hippocampus (1914)
	Brain (1981)
	Brainstem (43)
	Cerebellum (43)
	Cingulate Cortex (2843)
	Claustrum/Insula (1229)
	Dorsolateral prefrontal cortex (3824)
	Frontal Cortex (4049)
	Parieto-Occipital Cortex (2201)
	Posterior Superior Temporal Cortex (37)
	SubCortex (1144)
	Temporal cortex (3392)
	Ventral Anterior Cingulate (20)
	Ventral striatum (788)
	Visual Cortex (802)
	Visual cortex (3303)
	amygdaloid complex (576)
	brain (173)
	frontal lobe (5823)
	hippocampal cortex (hippocampal formation) (579)
	hippocampus (hippocampal formation) (522)
	medial frontal cortex (areas 24 25 and 32) (576)
	medial prefrontal cortex (715)
	occipital cortex (576)
	occipital lobe (955)
	parietal lobe (7171)
	parietal neocortex (498)
	temporal lobe (5774)
	temporal neocortex (550)
	ventral striatum (576)

	Human (74689)
	Mouse (87459)
	NHP (3204)

	Female (44466)
	Male (141492)

	Passed QC (160928)
	Failed QC (4424)