Allen Brain Atlas

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Aff3 ISH: Mus musculus, Male, P56, sagittal "AF4/FMR2 family, member 3", entrez_id: 16764, Experiment: 71656693, C57BL/6J Studies: Developing Mouse Brain, Mouse Brain
Sox9 ISH: Mus musculus, Male, P56, coronal Sox9, Experiment: 1422, C57BL/6J Studies: Developing Mouse Brain, Mouse Brain
Frzb ISH: Mus musculus, Male, P56, coronal Frzb, Experiment: 2237, C57BL/6J, Failed QC Studies: Developing Mouse Brain, Mouse Brain
Zfpm2 ISH: Mus musculus, Male, P56, coronal "zinc finger protein, multitype 2", entrez_id: 22762, Experiment: 75651162, C57BL/6J Studies: Developing Mouse Brain, Mouse Brain
Sohlh2 ISH: Mus musculus, Male, P56, sagittal spermatogenesis and oogenesis specific basic helix-loop-helix 2, entrez_id: 74434, Experiment: 71892089, C57BL/6J Studies: Developing Mouse Brain, Mouse Brain
E2f2 ISH: Mus musculus, Male, P56, sagittal E2f2, Experiment: 100144523, C57BL/6J Studies: Developing Mouse Brain, Mouse Brain
Slc17a8 ISH: Mus musculus, Male, P56, sagittal "solute carrier family 17 (sodium-dependent inorganic phosphate cotransporter), member 8", entrez_id: 216227, Experiment: 79760448, C57BL/6J Studies: Developing Mouse Brain, Mouse Brain
Fgfr2 ISH: Mus musculus, Male, P56, sagittal Fgfr2, Experiment: 447, C57BL/6J, Failed QC Studies: Developing Mouse Brain, Mouse Brain
Pcdha7 ISH: Mus musculus, Male, P56, sagittal protocadherin alpha 7, entrez_id: 12939, Experiment: 79354810, C57BL/6J Studies: Developing Mouse Brain, Mouse Brain
Rac2 ISH: Mus musculus, Male, P56, sagittal RAS-related C3 botulinum substrate 2, entrez_id: 19354, Experiment: 79534949, C57BL/6J Studies: Developing Mouse Brain, Mouse Brain
Rock2 ISH: Mus musculus, Male, P56, sagittal Rho-associated coiled-coil containing protein kinase 2, entrez_id: 19878, Experiment: 71456148, C57BL/6J Studies: Developing Mouse Brain, Mouse Brain
Itgb3 ISH: Mus musculus, Male, P56, sagittal integrin beta 3, entrez_id: 16416, Experiment: 69735628, C57BL/6J Studies: Developing Mouse Brain, Mouse Brain
Acvrl1 ISH: Mus musculus, Male, P56, sagittal "activin A receptor, type II-like 1", entrez_id: 11482, Experiment: 77454605, C57BL/6J Studies: Developing Mouse Brain, Mouse Brain
Sox11 ISH: Mus musculus, Male, P56, coronal SRY (sex determining region Y)-box 11, entrez_id: 20666, Experiment: 79912528, C57BL/6J Studies: Developing Mouse Brain, Mouse Brain
Dkk3 ISH: Mus musculus, Male, P56, sagittal dickkopf homolog 3 (Xenopus laevis), entrez_id: 50781, Experiment: 75496228, C57BL/6J Studies: Developing Mouse Brain, Mouse Brain
Satb1 ISH: Mus musculus, Male, P56, coronal Satb1, Experiment: 927, C57BL/6J Studies: Developing Mouse Brain, Mouse Brain
Gas1 ISH: Mus musculus, Male, P56, sagittal Gas1, Experiment: 2252, C57BL/6J Studies: Developing Mouse Brain, Mouse Brain
Prop1 ISH: Mus musculus, Male, P56, sagittal paired like homeodomain factor 1, entrez_id: 19127, Experiment: 71325366, C57BL/6J Studies: Developing Mouse Brain, Mouse Brain
Gpr37 ISH: Mus musculus, Male, P56, coronal Gpr37, Experiment: 2271, C57BL/6J Studies: Developing Mouse Brain, Mouse Brain
Rorb ISH: Mus musculus, Male, P56, coronal RAR-related orphan receptor beta, entrez_id: 225998, Experiment: 79556597, C57BL/6J Studies: Developing Mouse Brain, Mouse Brain
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Aff3 ISH: Mus musculus, Male, P56, sagittal

"AF4/FMR2 family, member 3", entrez_id: 16764, Experiment: 71656693, C57BL/6J

Studies: Developing Mouse Brain, Mouse Brain

Sox9 ISH: Mus musculus, Male, P56, coronal

Sox9, Experiment: 1422, C57BL/6J

Studies: Developing Mouse Brain, Mouse Brain

Frzb ISH: Mus musculus, Male, P56, coronal

Frzb, Experiment: 2237, C57BL/6J, Failed QC

Studies: Developing Mouse Brain, Mouse Brain

Zfpm2 ISH: Mus musculus, Male, P56, coronal

"zinc finger protein, multitype 2", entrez_id: 22762, Experiment: 75651162, C57BL/6J

Studies: Developing Mouse Brain, Mouse Brain

Sohlh2 ISH: Mus musculus, Male, P56, sagittal

spermatogenesis and oogenesis specific basic helix-loop-helix 2, entrez_id: 74434, Experiment: 71892089, C57BL/6J

Studies: Developing Mouse Brain, Mouse Brain

E2f2 ISH: Mus musculus, Male, P56, sagittal

E2f2, Experiment: 100144523, C57BL/6J

Studies: Developing Mouse Brain, Mouse Brain

Slc17a8 ISH: Mus musculus, Male, P56, sagittal

"solute carrier family 17 (sodium-dependent inorganic phosphate cotransporter), member 8", entrez_id: 216227, Experiment: 79760448, C57BL/6J

Studies: Developing Mouse Brain, Mouse Brain

Fgfr2 ISH: Mus musculus, Male, P56, sagittal

Fgfr2, Experiment: 447, C57BL/6J, Failed QC

Studies: Developing Mouse Brain, Mouse Brain

Pcdha7 ISH: Mus musculus, Male, P56, sagittal

protocadherin alpha 7, entrez_id: 12939, Experiment: 79354810, C57BL/6J

Studies: Developing Mouse Brain, Mouse Brain

Rac2 ISH: Mus musculus, Male, P56, sagittal

RAS-related C3 botulinum substrate 2, entrez_id: 19354, Experiment: 79534949, C57BL/6J

Studies: Developing Mouse Brain, Mouse Brain

Rock2 ISH: Mus musculus, Male, P56, sagittal

Rho-associated coiled-coil containing protein kinase 2, entrez_id: 19878, Experiment: 71456148, C57BL/6J

Studies: Developing Mouse Brain, Mouse Brain

Itgb3 ISH: Mus musculus, Male, P56, sagittal

integrin beta 3, entrez_id: 16416, Experiment: 69735628, C57BL/6J

Studies: Developing Mouse Brain, Mouse Brain

Acvrl1 ISH: Mus musculus, Male, P56, sagittal

"activin A receptor, type II-like 1", entrez_id: 11482, Experiment: 77454605, C57BL/6J

Studies: Developing Mouse Brain, Mouse Brain

Sox11 ISH: Mus musculus, Male, P56, coronal

SRY (sex determining region Y)-box 11, entrez_id: 20666, Experiment: 79912528, C57BL/6J

Studies: Developing Mouse Brain, Mouse Brain

Dkk3 ISH: Mus musculus, Male, P56, sagittal

dickkopf homolog 3 (Xenopus laevis), entrez_id: 50781, Experiment: 75496228, C57BL/6J

Studies: Developing Mouse Brain, Mouse Brain

Satb1 ISH: Mus musculus, Male, P56, coronal

Satb1, Experiment: 927, C57BL/6J

Studies: Developing Mouse Brain, Mouse Brain

Gas1 ISH: Mus musculus, Male, P56, sagittal

Gas1, Experiment: 2252, C57BL/6J

Studies: Developing Mouse Brain, Mouse Brain

Prop1 ISH: Mus musculus, Male, P56, sagittal

paired like homeodomain factor 1, entrez_id: 19127, Experiment: 71325366, C57BL/6J

Studies: Developing Mouse Brain, Mouse Brain

Gpr37 ISH: Mus musculus, Male, P56, coronal

Gpr37, Experiment: 2271, C57BL/6J

Studies: Developing Mouse Brain, Mouse Brain

Rorb ISH: Mus musculus, Male, P56, coronal

RAR-related orphan receptor beta, entrez_id: 225998, Experiment: 79556597, C57BL/6J

Studies: Developing Mouse Brain, Mouse Brain

	Prenatal (9896)
	Juvenile (57411)
	Adult (116514)
	Aged (32659)

	FISH (300)
	ISH (137378)
	Microarray (290)
	RNA Sequencing (26216)
	Resource (5)

	Aging Dementia TBI - ISH data (1570)
	Aging Dementia TBI - non-ISH data (109)
	Developing Human Brain ISH (3941)
	Developing Human Prenatal LMD Microarray (243)
	Developing Human Reference Data (163)
	Developing Human Transcriptome (285)
	Developing Mouse Brain (21463)
	Glioblastoma (20203)
	Human Brain ISH Autism Study (528)
	Human Brain ISH Cortex Study (6670)
	Human Brain ISH Neurotransmitter Study (11670)
	Human Brain ISH Schizophrenia Study (3378)
	Human Brain ISH SubCortex Study (462)
	Human Brain Microarray (88)
	Human Glioblastoma RNASeq (26085)
	Mouse Brain (28886)
	Mouse Brain Reference Data (1)
	Mouse Cell Types - transcriptomics data (112)
	Mouse Connectivity Projection (1)
	Mouse Connectivity Transgenic Characterization (1850)
	Mouse Spinal Cord (36698)
	Mouse Strains (1080)
	Non-Human Primate ISH (3057)
	Non-Human Primate Macrodissection Microarray (65)
	Non-Human Primate Microdissection Microarray (82)
	Non-Human Primate Molecular Map (133)
	Sleep (1727)

	129/SvJ (10)
	129S1/SvlmJ (124)
	B6.129 (374)
	B6.129.FVB (39)
	B6.C3H (17)
	B6.FVB (35)
	B6.FVB(ICR) (37)
	B6;CFW (2)
	B6;ICR (2)
	C57BL/6J (85098)
	CAST/EiJ (124)
	DBA/2J (124)
	FVB (23)
	FVB.CD1(ICR) (14)
	FVB/NJ (8)
	PWD/PhJ (93)
	SPRET/EiJ (124)
	WSB/EiJ (93)
	ai2/thcre (1)
	ctgf-cre (2)
	wfs1-creer (2)

	Asian (339)
	Black or African American (8233)
	European (122)
	Hispanic (4125)
	Two or more races (122)
	White or Caucasian (14290)

	Dorsal to Ventral (1096)
	Lateral to Medial (3332)
	Medial to Lateral (5219)
	Ventral to Dorsal (7134)
	coronal (27597)
	sagittal (43609)
	variable (38372)

	autism (258)
	control (26146)
	glioblastoma (32400)
	schizophrenia (1231)
	traumatic brain injury (762)

	Amygdala/Hippocampus (1914)
	Brain (1981)
	Brainstem (43)
	Cerebellum (43)
	Cingulate Cortex (2843)
	Claustrum/Insula (1229)
	Dorsolateral prefrontal cortex (3824)
	Frontal Cortex (4049)
	Parieto-Occipital Cortex (2201)
	Posterior Superior Temporal Cortex (37)
	SubCortex (1144)
	Temporal cortex (3392)
	Ventral Anterior Cingulate (20)
	Ventral striatum (788)
	Visual Cortex (802)
	Visual cortex (3303)
	amygdaloid complex (576)
	brain (173)
	frontal lobe (5823)
	hippocampal cortex (hippocampal formation) (579)
	hippocampus (hippocampal formation) (522)
	medial frontal cortex (areas 24 25 and 32) (576)
	medial prefrontal cortex (715)
	occipital cortex (576)
	occipital lobe (955)
	parietal lobe (7171)
	parietal neocortex (498)
	temporal lobe (5774)
	temporal neocortex (550)
	ventral striatum (576)

	Human (74689)
	Mouse (87459)
	NHP (3204)

	Female (44466)
	Male (141492)

	Passed QC (160928)
	Failed QC (4424)