Allen Brain Atlas

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Gria1 ISH: Mus musculus, Male, P56, sagittal "glutamate receptor, ionotropic, AMPA1 (alpha 1)", entrez_id: 14799, Experiment: 81790722, C57BL/6J Studies: Developing Mouse Brain, Mouse Brain
Spp1 ISH: Mus musculus, Male, P56, coronal secreted phosphoprotein 1, entrez_id: 20750, Experiment: 70436740, C57BL/6J Studies: Developing Mouse Brain, Mouse Brain
Onecut3 ISH: Mus musculus, Male, P56, sagittal "one cut domain, family member 3", entrez_id: 246086, Experiment: 81655213, C57BL/6J Studies: Developing Mouse Brain, Mouse Brain
Cdh13 ISH: Mus musculus, Male, P56, coronal cadherin 13, entrez_id: 12554, Experiment: 77869863, C57BL/6J Studies: Developing Mouse Brain, Mouse Brain
Dsg1b ISH: Mus musculus, Male, P56, sagittal desmoglein 1 beta, entrez_id: 225256, Experiment: 81655556, C57BL/6J Studies: Developing Mouse Brain, Mouse Brain
Trpc4 ISH: Mus musculus, Male, P56, sagittal Trpc4, Experiment: 1306, C57BL/6J Studies: Developing Mouse Brain, Mouse Brain
Phf19 ISH: Mus musculus, Male, P56, sagittal PHD finger protein 19, entrez_id: 74016, Experiment: 68157404, C57BL/6J Studies: Developing Mouse Brain, Mouse Brain
Slc6a3 ISH: Mus musculus, Male, P56, sagittal Slc6a3, Experiment: 979, C57BL/6J Studies: Developing Mouse Brain, Mouse Brain
Nrip3 ISH: Mus musculus, Male, P56, coronal nuclear receptor interacting protein 3, entrez_id: 78593, Experiment: 73520999, C57BL/6J Studies: Developing Mouse Brain, Mouse Brain
Chrnb2 ISH: Mus musculus, Male, P56, sagittal Chrnb2, Experiment: 2098, C57BL/6J Studies: Developing Mouse Brain, Mouse Brain
Wnt5a ISH: Mus musculus, Male, P56, sagittal "wingless-type MMTV integration site family, member 5A", entrez_id: 22418, Experiment: 130531, C57BL/6J, Failed QC Studies: Developing Mouse Brain, Mouse Brain
Rxra ISH: Mus musculus, Male, P56, sagittal Rxra, Experiment: 916, C57BL/6J, Failed QC Studies: Developing Mouse Brain, Mouse Brain
Ets2 ISH: Mus musculus, Male, P56, sagittal Ets2, Experiment: 407, C57BL/6J, Failed QC Studies: Developing Mouse Brain, Mouse Brain
Atf1 ISH: Mus musculus, Male, P56, sagittal activating transcription factor 1, entrez_id: 11908, Experiment: 71724810, C57BL/6J Studies: Developing Mouse Brain, Mouse Brain
Lbh ISH: Mus musculus, Male, P56, sagittal limb-bud and heart, entrez_id: 77889, Experiment: 69015422, C57BL/6J Studies: Developing Mouse Brain, Mouse Brain
Pygo2 ISH: Mus musculus, Male, P56, sagittal pygopus 2, entrez_id: 68911, Experiment: 68845627, C57BL/6J Studies: Developing Mouse Brain, Mouse Brain
Gabrb2 ISH: Mus musculus, Male, P56, sagittal Gabrb2, Experiment: 473, C57BL/6J, Failed QC Studies: Developing Mouse Brain, Mouse Brain
Col18a1 ISH: Mus musculus, Male, P56, coronal Col18a1, Experiment: 285, C57BL/6J, Failed QC Studies: Developing Mouse Brain, Mouse Brain
Grid1 ISH: Mus musculus, Male, P56, coronal "glutamate receptor, ionotropic, delta 1", entrez_id: 14803, Experiment: 74724739, C57BL/6J Studies: Developing Mouse Brain, Mouse Brain
Rhox6 ISH: Mus musculus, Male, P56, sagittal reproductive homeobox 6, entrez_id: 19202, Experiment: 77464894, C57BL/6J Studies: Developing Mouse Brain, Mouse Brain
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Gria1 ISH: Mus musculus, Male, P56, sagittal

"glutamate receptor, ionotropic, AMPA1 (alpha 1)", entrez_id: 14799, Experiment: 81790722, C57BL/6J

Studies: Developing Mouse Brain, Mouse Brain

Spp1 ISH: Mus musculus, Male, P56, coronal

secreted phosphoprotein 1, entrez_id: 20750, Experiment: 70436740, C57BL/6J

Studies: Developing Mouse Brain, Mouse Brain

Onecut3 ISH: Mus musculus, Male, P56, sagittal

"one cut domain, family member 3", entrez_id: 246086, Experiment: 81655213, C57BL/6J

Studies: Developing Mouse Brain, Mouse Brain

Cdh13 ISH: Mus musculus, Male, P56, coronal

cadherin 13, entrez_id: 12554, Experiment: 77869863, C57BL/6J

Studies: Developing Mouse Brain, Mouse Brain

Dsg1b ISH: Mus musculus, Male, P56, sagittal

desmoglein 1 beta, entrez_id: 225256, Experiment: 81655556, C57BL/6J

Studies: Developing Mouse Brain, Mouse Brain

Trpc4 ISH: Mus musculus, Male, P56, sagittal

Trpc4, Experiment: 1306, C57BL/6J

Studies: Developing Mouse Brain, Mouse Brain

Phf19 ISH: Mus musculus, Male, P56, sagittal

PHD finger protein 19, entrez_id: 74016, Experiment: 68157404, C57BL/6J

Studies: Developing Mouse Brain, Mouse Brain

Slc6a3 ISH: Mus musculus, Male, P56, sagittal

Slc6a3, Experiment: 979, C57BL/6J

Studies: Developing Mouse Brain, Mouse Brain

Nrip3 ISH: Mus musculus, Male, P56, coronal

nuclear receptor interacting protein 3, entrez_id: 78593, Experiment: 73520999, C57BL/6J

Studies: Developing Mouse Brain, Mouse Brain

Chrnb2 ISH: Mus musculus, Male, P56, sagittal

Chrnb2, Experiment: 2098, C57BL/6J

Studies: Developing Mouse Brain, Mouse Brain

Wnt5a ISH: Mus musculus, Male, P56, sagittal

"wingless-type MMTV integration site family, member 5A", entrez_id: 22418, Experiment: 130531, C57BL/6J, Failed QC

Studies: Developing Mouse Brain, Mouse Brain

Rxra ISH: Mus musculus, Male, P56, sagittal

Rxra, Experiment: 916, C57BL/6J, Failed QC

Studies: Developing Mouse Brain, Mouse Brain

Ets2 ISH: Mus musculus, Male, P56, sagittal

Ets2, Experiment: 407, C57BL/6J, Failed QC

Studies: Developing Mouse Brain, Mouse Brain

Atf1 ISH: Mus musculus, Male, P56, sagittal

activating transcription factor 1, entrez_id: 11908, Experiment: 71724810, C57BL/6J

Studies: Developing Mouse Brain, Mouse Brain

Lbh ISH: Mus musculus, Male, P56, sagittal

limb-bud and heart, entrez_id: 77889, Experiment: 69015422, C57BL/6J

Studies: Developing Mouse Brain, Mouse Brain

Pygo2 ISH: Mus musculus, Male, P56, sagittal

pygopus 2, entrez_id: 68911, Experiment: 68845627, C57BL/6J

Studies: Developing Mouse Brain, Mouse Brain

Gabrb2 ISH: Mus musculus, Male, P56, sagittal

Gabrb2, Experiment: 473, C57BL/6J, Failed QC

Studies: Developing Mouse Brain, Mouse Brain

Col18a1 ISH: Mus musculus, Male, P56, coronal

Col18a1, Experiment: 285, C57BL/6J, Failed QC

Studies: Developing Mouse Brain, Mouse Brain

Grid1 ISH: Mus musculus, Male, P56, coronal

"glutamate receptor, ionotropic, delta 1", entrez_id: 14803, Experiment: 74724739, C57BL/6J

Studies: Developing Mouse Brain, Mouse Brain

Rhox6 ISH: Mus musculus, Male, P56, sagittal

reproductive homeobox 6, entrez_id: 19202, Experiment: 77464894, C57BL/6J

Studies: Developing Mouse Brain, Mouse Brain

	Prenatal (9896)
	Juvenile (57411)
	Adult (116514)
	Aged (32659)

	FISH (300)
	ISH (137378)
	Microarray (290)
	RNA Sequencing (26216)
	Resource (5)

	Aging Dementia TBI - ISH data (1570)
	Aging Dementia TBI - non-ISH data (109)
	Developing Human Brain ISH (3941)
	Developing Human Prenatal LMD Microarray (243)
	Developing Human Reference Data (163)
	Developing Human Transcriptome (285)
	Developing Mouse Brain (21463)
	Glioblastoma (20203)
	Human Brain ISH Autism Study (528)
	Human Brain ISH Cortex Study (6670)
	Human Brain ISH Neurotransmitter Study (11670)
	Human Brain ISH Schizophrenia Study (3378)
	Human Brain ISH SubCortex Study (462)
	Human Brain Microarray (88)
	Human Glioblastoma RNASeq (26085)
	Mouse Brain (28886)
	Mouse Brain Reference Data (1)
	Mouse Cell Types - transcriptomics data (112)
	Mouse Connectivity Projection (1)
	Mouse Connectivity Transgenic Characterization (1850)
	Mouse Spinal Cord (36698)
	Mouse Strains (1080)
	Non-Human Primate ISH (3057)
	Non-Human Primate Macrodissection Microarray (65)
	Non-Human Primate Microdissection Microarray (82)
	Non-Human Primate Molecular Map (133)
	Sleep (1727)

	129/SvJ (10)
	129S1/SvlmJ (124)
	B6.129 (374)
	B6.129.FVB (39)
	B6.C3H (17)
	B6.FVB (35)
	B6.FVB(ICR) (37)
	B6;CFW (2)
	B6;ICR (2)
	C57BL/6J (85098)
	CAST/EiJ (124)
	DBA/2J (124)
	FVB (23)
	FVB.CD1(ICR) (14)
	FVB/NJ (8)
	PWD/PhJ (93)
	SPRET/EiJ (124)
	WSB/EiJ (93)
	ai2/thcre (1)
	ctgf-cre (2)
	wfs1-creer (2)

	Asian (339)
	Black or African American (8233)
	European (122)
	Hispanic (4125)
	Two or more races (122)
	White or Caucasian (14290)

	Dorsal to Ventral (1096)
	Lateral to Medial (3332)
	Medial to Lateral (5219)
	Ventral to Dorsal (7134)
	coronal (27597)
	sagittal (43609)
	variable (38372)

	autism (258)
	control (26146)
	glioblastoma (32400)
	schizophrenia (1231)
	traumatic brain injury (762)

	Amygdala/Hippocampus (1914)
	Brain (1981)
	Brainstem (43)
	Cerebellum (43)
	Cingulate Cortex (2843)
	Claustrum/Insula (1229)
	Dorsolateral prefrontal cortex (3824)
	Frontal Cortex (4049)
	Parieto-Occipital Cortex (2201)
	Posterior Superior Temporal Cortex (37)
	SubCortex (1144)
	Temporal cortex (3392)
	Ventral Anterior Cingulate (20)
	Ventral striatum (788)
	Visual Cortex (802)
	Visual cortex (3303)
	amygdaloid complex (576)
	brain (173)
	frontal lobe (5823)
	hippocampal cortex (hippocampal formation) (579)
	hippocampus (hippocampal formation) (522)
	medial frontal cortex (areas 24 25 and 32) (576)
	medial prefrontal cortex (715)
	occipital cortex (576)
	occipital lobe (955)
	parietal lobe (7171)
	parietal neocortex (498)
	temporal lobe (5774)
	temporal neocortex (550)
	ventral striatum (576)

	Human (74689)
	Mouse (87459)
	NHP (3204)

	Female (44466)
	Male (141492)

	Passed QC (160928)
	Failed QC (4424)