Allen Brain Atlas

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Ebf4 ISH: Mus musculus, Male, P56, coronal early B cell factor 4, entrez_id: 228598, Experiment: 71020443, C57BL/6J Studies: Developing Mouse Brain, Mouse Brain
Clec7a ISH: Mus musculus, Male, P56, sagittal "C-type lectin domain family 7, member a", entrez_id: 56644, Experiment: 81654145, C57BL/6J Studies: Developing Mouse Brain, Mouse Brain
Erbb2 ISH: Mus musculus, Male, P56, coronal Erbb2, Experiment: 1709, C57BL/6J Studies: Developing Mouse Brain, Mouse Brain
Sry ISH: Mus musculus, Male, P56, sagittal sex determining region of Chr Y, entrez_id: 21674, Experiment: 77932785, C57BL/6J Studies: Developing Mouse Brain, Mouse Brain
Lgi2 ISH: Mus musculus, Male, P56, coronal "leucine-rich repeat LGI family, member 2", entrez_id: 246316, Experiment: 71670485, C57BL/6J Studies: Developing Mouse Brain, Mouse Brain
Rai1 ISH: Mus musculus, Male, P56, sagittal retinoic acid induced 1, entrez_id: 19377, Experiment: 69816751, C57BL/6J Studies: Developing Mouse Brain, Mouse Brain
Ep300 ISH: Mus musculus, Male, P56, sagittal E1A binding protein p300, entrez_id: 328572, Experiment: 73497135, C57BL/6J Studies: Developing Mouse Brain, Mouse Brain
Jun ISH: Mus musculus, Male, P56, sagittal Jun, Experiment: 2334, C57BL/6J Studies: Developing Mouse Brain, Mouse Brain
Pcp2 ISH: Mus musculus, Male, P56, coronal Purkinje cell protein 2 (L7), entrez_id: 18545, Experiment: 79490073, C57BL/6J Studies: Developing Mouse Brain, Mouse Brain
Pknox2 ISH: Mus musculus, Male, P56, sagittal Pbx/knotted 1 homeobox 2, entrez_id: 208076, Experiment: 72076563, C57BL/6J Studies: Developing Mouse Brain, Mouse Brain
Hspb8 ISH: Mus musculus, Male, P56, coronal Hspb8, Experiment: 1181, C57BL/6J Studies: Developing Mouse Brain, Mouse Brain
Psen1 ISH: Mus musculus, Male, P56, sagittal Psen1, Experiment: 849, C57BL/6J, Failed QC Studies: Developing Mouse Brain, Mouse Brain
Maob ISH: Mus musculus, Male, P56, coronal monoamine oxidase B, entrez_id: 109731, Experiment: 71670489, C57BL/6J Studies: Developing Mouse Brain, Mouse Brain
Tfdp2 ISH: Mus musculus, Male, P56, sagittal Tfdp2, Experiment: 74509589, C57BL/6J Studies: Developing Mouse Brain, Mouse Brain
Chrna4 ISH: Mus musculus, Male, P56, sagittal "cholinergic receptor, nicotinic, alpha polypeptide 4", entrez_id: 11438, Experiment: 77454722, C57BL/6J Studies: Developing Mouse Brain, Mouse Brain
Alx4 ISH: Mus musculus, Male, P56, sagittal aristaless-like homeobox 4, entrez_id: 11695, Experiment: 77454703, C57BL/6J Studies: Developing Mouse Brain, Mouse Brain
Reln ISH: Mus musculus, Male, P56, sagittal Reln, Experiment: 891, C57BL/6J Studies: Developing Mouse Brain, Mouse Brain
Prlr ISH: Mus musculus, Male, P56, sagittal prolactin receptor, entrez_id: 19116, Experiment: 69526444, C57BL/6J Studies: Developing Mouse Brain, Mouse Brain
Eng ISH: Mus musculus, Male, P56, sagittal endoglin, entrez_id: 13805, Experiment: 68637957, C57BL/6J Studies: Developing Mouse Brain, Mouse Brain
Slc6a1 ISH: Mus musculus, Male, P56, sagittal "solute carrier family 6 (neurotransmitter transporter, GABA), member 1", entrez_id: 232333, Experiment: 79904152, C57BL/6J Studies: Developing Mouse Brain, Mouse Brain
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Ebf4 ISH: Mus musculus, Male, P56, coronal

early B cell factor 4, entrez_id: 228598, Experiment: 71020443, C57BL/6J

Studies: Developing Mouse Brain, Mouse Brain

Clec7a ISH: Mus musculus, Male, P56, sagittal

"C-type lectin domain family 7, member a", entrez_id: 56644, Experiment: 81654145, C57BL/6J

Studies: Developing Mouse Brain, Mouse Brain

Erbb2 ISH: Mus musculus, Male, P56, coronal

Erbb2, Experiment: 1709, C57BL/6J

Studies: Developing Mouse Brain, Mouse Brain

Sry ISH: Mus musculus, Male, P56, sagittal

sex determining region of Chr Y, entrez_id: 21674, Experiment: 77932785, C57BL/6J

Studies: Developing Mouse Brain, Mouse Brain

Lgi2 ISH: Mus musculus, Male, P56, coronal

"leucine-rich repeat LGI family, member 2", entrez_id: 246316, Experiment: 71670485, C57BL/6J

Studies: Developing Mouse Brain, Mouse Brain

Rai1 ISH: Mus musculus, Male, P56, sagittal

retinoic acid induced 1, entrez_id: 19377, Experiment: 69816751, C57BL/6J

Studies: Developing Mouse Brain, Mouse Brain

Ep300 ISH: Mus musculus, Male, P56, sagittal

E1A binding protein p300, entrez_id: 328572, Experiment: 73497135, C57BL/6J

Studies: Developing Mouse Brain, Mouse Brain

Jun ISH: Mus musculus, Male, P56, sagittal

Jun, Experiment: 2334, C57BL/6J

Studies: Developing Mouse Brain, Mouse Brain

Pcp2 ISH: Mus musculus, Male, P56, coronal

Purkinje cell protein 2 (L7), entrez_id: 18545, Experiment: 79490073, C57BL/6J

Studies: Developing Mouse Brain, Mouse Brain

Pknox2 ISH: Mus musculus, Male, P56, sagittal

Pbx/knotted 1 homeobox 2, entrez_id: 208076, Experiment: 72076563, C57BL/6J

Studies: Developing Mouse Brain, Mouse Brain

Hspb8 ISH: Mus musculus, Male, P56, coronal

Hspb8, Experiment: 1181, C57BL/6J

Studies: Developing Mouse Brain, Mouse Brain

Psen1 ISH: Mus musculus, Male, P56, sagittal

Psen1, Experiment: 849, C57BL/6J, Failed QC

Studies: Developing Mouse Brain, Mouse Brain

Maob ISH: Mus musculus, Male, P56, coronal

monoamine oxidase B, entrez_id: 109731, Experiment: 71670489, C57BL/6J

Studies: Developing Mouse Brain, Mouse Brain

Tfdp2 ISH: Mus musculus, Male, P56, sagittal

Tfdp2, Experiment: 74509589, C57BL/6J

Studies: Developing Mouse Brain, Mouse Brain

Chrna4 ISH: Mus musculus, Male, P56, sagittal

"cholinergic receptor, nicotinic, alpha polypeptide 4", entrez_id: 11438, Experiment: 77454722, C57BL/6J

Studies: Developing Mouse Brain, Mouse Brain

Alx4 ISH: Mus musculus, Male, P56, sagittal

aristaless-like homeobox 4, entrez_id: 11695, Experiment: 77454703, C57BL/6J

Studies: Developing Mouse Brain, Mouse Brain

Reln ISH: Mus musculus, Male, P56, sagittal

Reln, Experiment: 891, C57BL/6J

Studies: Developing Mouse Brain, Mouse Brain

Prlr ISH: Mus musculus, Male, P56, sagittal

prolactin receptor, entrez_id: 19116, Experiment: 69526444, C57BL/6J

Studies: Developing Mouse Brain, Mouse Brain

Eng ISH: Mus musculus, Male, P56, sagittal

endoglin, entrez_id: 13805, Experiment: 68637957, C57BL/6J

Studies: Developing Mouse Brain, Mouse Brain

Slc6a1 ISH: Mus musculus, Male, P56, sagittal

"solute carrier family 6 (neurotransmitter transporter, GABA), member 1", entrez_id: 232333, Experiment: 79904152, C57BL/6J

Studies: Developing Mouse Brain, Mouse Brain

	Prenatal (9896)
	Juvenile (57411)
	Adult (116514)
	Aged (32659)

	FISH (300)
	ISH (137378)
	Microarray (290)
	RNA Sequencing (26216)
	Resource (5)

	Aging Dementia TBI - ISH data (1570)
	Aging Dementia TBI - non-ISH data (109)
	Developing Human Brain ISH (3941)
	Developing Human Prenatal LMD Microarray (243)
	Developing Human Reference Data (163)
	Developing Human Transcriptome (285)
	Developing Mouse Brain (21463)
	Glioblastoma (20203)
	Human Brain ISH Autism Study (528)
	Human Brain ISH Cortex Study (6670)
	Human Brain ISH Neurotransmitter Study (11670)
	Human Brain ISH Schizophrenia Study (3378)
	Human Brain ISH SubCortex Study (462)
	Human Brain Microarray (88)
	Human Glioblastoma RNASeq (26085)
	Mouse Brain (28886)
	Mouse Brain Reference Data (1)
	Mouse Cell Types - transcriptomics data (112)
	Mouse Connectivity Projection (1)
	Mouse Connectivity Transgenic Characterization (1850)
	Mouse Spinal Cord (36698)
	Mouse Strains (1080)
	Non-Human Primate ISH (3057)
	Non-Human Primate Macrodissection Microarray (65)
	Non-Human Primate Microdissection Microarray (82)
	Non-Human Primate Molecular Map (133)
	Sleep (1727)

	129/SvJ (10)
	129S1/SvlmJ (124)
	B6.129 (374)
	B6.129.FVB (39)
	B6.C3H (17)
	B6.FVB (35)
	B6.FVB(ICR) (37)
	B6;CFW (2)
	B6;ICR (2)
	C57BL/6J (85098)
	CAST/EiJ (124)
	DBA/2J (124)
	FVB (23)
	FVB.CD1(ICR) (14)
	FVB/NJ (8)
	PWD/PhJ (93)
	SPRET/EiJ (124)
	WSB/EiJ (93)
	ai2/thcre (1)
	ctgf-cre (2)
	wfs1-creer (2)

	Asian (339)
	Black or African American (8233)
	European (122)
	Hispanic (4125)
	Two or more races (122)
	White or Caucasian (14290)

	Dorsal to Ventral (1096)
	Lateral to Medial (3332)
	Medial to Lateral (5219)
	Ventral to Dorsal (7134)
	coronal (27597)
	sagittal (43609)
	variable (38372)

	autism (258)
	control (26146)
	glioblastoma (32400)
	schizophrenia (1231)
	traumatic brain injury (762)

	Amygdala/Hippocampus (1914)
	Brain (1981)
	Brainstem (43)
	Cerebellum (43)
	Cingulate Cortex (2843)
	Claustrum/Insula (1229)
	Dorsolateral prefrontal cortex (3824)
	Frontal Cortex (4049)
	Parieto-Occipital Cortex (2201)
	Posterior Superior Temporal Cortex (37)
	SubCortex (1144)
	Temporal cortex (3392)
	Ventral Anterior Cingulate (20)
	Ventral striatum (788)
	Visual Cortex (802)
	Visual cortex (3303)
	amygdaloid complex (576)
	brain (173)
	frontal lobe (5823)
	hippocampal cortex (hippocampal formation) (579)
	hippocampus (hippocampal formation) (522)
	medial frontal cortex (areas 24 25 and 32) (576)
	medial prefrontal cortex (715)
	occipital cortex (576)
	occipital lobe (955)
	parietal lobe (7171)
	parietal neocortex (498)
	temporal lobe (5774)
	temporal neocortex (550)
	ventral striatum (576)

	Human (74689)
	Mouse (87459)
	NHP (3204)

	Female (44466)
	Male (141492)

	Passed QC (160928)
	Failed QC (4424)