Allen Brain Atlas

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Nek7 ISH: Mus musculus, Male, P56, coronal NIMA (never in mitosis gene a)-related expressed kinase 7, entrez_id: 59125, Experiment: 72339542, C57BL/6J Studies: Developing Mouse Brain, Mouse Brain
Nrcam ISH: Mus musculus, Male, P56, sagittal Nrcam, Experiment: 173, C57BL/6J Studies: Developing Mouse Brain, Mouse Brain
E2f5 ISH: Mus musculus, Male, P56, sagittal E2F transcription factor 5, entrez_id: 13559, Experiment: 71161012, C57BL/6J Studies: Developing Mouse Brain, Mouse Brain
Foxs1 ISH: Mus musculus, Male, P56, sagittal forkhead box S1, entrez_id: 14239, Experiment: 69288980, C57BL/6J Studies: Developing Mouse Brain, Mouse Brain
Ntn1 ISH: Mus musculus, Male, P56, sagittal netrin 1, entrez_id: 18208, Experiment: 71234678, C57BL/6J Studies: Developing Mouse Brain, Mouse Brain
Axin1 ISH: Mus musculus, Male, P56, coronal Axin1, Experiment: 2053, C57BL/6J Studies: Developing Mouse Brain, Mouse Brain
Igfbp5 ISH: Mus musculus, Male, P56, coronal insulin-like growth factor binding protein 5, entrez_id: 16011, Experiment: 73592530, C57BL/6J Studies: Developing Mouse Brain, Mouse Brain
Ndnf ISH: Mus musculus, Male, P56, coronal neuron-derived neurotrophic factor, entrez_id: 68169, Experiment: 72080134, C57BL/6J Studies: Developing Mouse Brain, Mouse Brain
Nrip3 ISH: Mus musculus, Male, P56, sagittal nuclear receptor interacting protein 3, entrez_id: 78593, Experiment: 69782385, C57BL/6J Studies: Developing Mouse Brain, Mouse Brain
Drd5 ISH: Mus musculus, Male, P56, sagittal dopamine receptor D5, entrez_id: 13492, Experiment: 81600116, C57BL/6J, Failed QC Studies: Developing Mouse Brain, Mouse Brain
Apoe ISH: Mus musculus, Male, P56, coronal apolipoprotein E, entrez_id: 11816, Experiment: 79490110, C57BL/6J Studies: Developing Mouse Brain, Mouse Brain
Fstl1 ISH: Mus musculus, Male, P56, sagittal follistatin-like 1, entrez_id: 14314, Experiment: 68633050, C57BL/6J Studies: Developing Mouse Brain, Mouse Brain
Egfr ISH: Mus musculus, Male, P56, sagittal Egfr, Experiment: 1702, C57BL/6J, Failed QC Studies: Developing Mouse Brain, Mouse Brain
Wnt1 ISH: Mus musculus, Male, P56, coronal Wnt1, Experiment: 112644522, C57BL/6J Studies: Developing Mouse Brain, Mouse Brain
Rnf14 ISH: Mus musculus, Male, P56, sagittal ring finger protein 14, entrez_id: 56736, Experiment: 69013560, C57BL/6J Studies: Developing Mouse Brain, Mouse Brain
L1cam ISH: Mus musculus, Male, P56, coronal L1cam, Experiment: 620, C57BL/6J Studies: Developing Mouse Brain, Mouse Brain
Tcf4 ISH: Mus musculus, Male, P56, sagittal Tcf4, Experiment: 1045, C57BL/6J Studies: Developing Mouse Brain, Mouse Brain
Foxo1 ISH: Mus musculus, Male, P56, coronal forkhead box O1, entrez_id: 56458, Experiment: 71249055, C57BL/6J Studies: Developing Mouse Brain, Mouse Brain
Nkx2-9 ISH: Mus musculus, Male, P56, sagittal NK2 homeobox 9, entrez_id: 18094, Experiment: 75934936, C57BL/6J Studies: Developing Mouse Brain, Mouse Brain
P2rx4 ISH: Mus musculus, Male, P56, coronal "purinergic receptor P2X, ligand-gated ion channel 4", entrez_id: 18438, Experiment: 75551474, C57BL/6J Studies: Developing Mouse Brain, Mouse Brain
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Nek7 ISH: Mus musculus, Male, P56, coronal

NIMA (never in mitosis gene a)-related expressed kinase 7, entrez_id: 59125, Experiment: 72339542, C57BL/6J

Studies: Developing Mouse Brain, Mouse Brain

Nrcam ISH: Mus musculus, Male, P56, sagittal

Nrcam, Experiment: 173, C57BL/6J

Studies: Developing Mouse Brain, Mouse Brain

E2f5 ISH: Mus musculus, Male, P56, sagittal

E2F transcription factor 5, entrez_id: 13559, Experiment: 71161012, C57BL/6J

Studies: Developing Mouse Brain, Mouse Brain

Foxs1 ISH: Mus musculus, Male, P56, sagittal

forkhead box S1, entrez_id: 14239, Experiment: 69288980, C57BL/6J

Studies: Developing Mouse Brain, Mouse Brain

Ntn1 ISH: Mus musculus, Male, P56, sagittal

netrin 1, entrez_id: 18208, Experiment: 71234678, C57BL/6J

Studies: Developing Mouse Brain, Mouse Brain

Axin1 ISH: Mus musculus, Male, P56, coronal

Axin1, Experiment: 2053, C57BL/6J

Studies: Developing Mouse Brain, Mouse Brain

Igfbp5 ISH: Mus musculus, Male, P56, coronal

insulin-like growth factor binding protein 5, entrez_id: 16011, Experiment: 73592530, C57BL/6J

Studies: Developing Mouse Brain, Mouse Brain

Ndnf ISH: Mus musculus, Male, P56, coronal

neuron-derived neurotrophic factor, entrez_id: 68169, Experiment: 72080134, C57BL/6J

Studies: Developing Mouse Brain, Mouse Brain

Nrip3 ISH: Mus musculus, Male, P56, sagittal

nuclear receptor interacting protein 3, entrez_id: 78593, Experiment: 69782385, C57BL/6J

Studies: Developing Mouse Brain, Mouse Brain

Drd5 ISH: Mus musculus, Male, P56, sagittal

dopamine receptor D5, entrez_id: 13492, Experiment: 81600116, C57BL/6J, Failed QC

Studies: Developing Mouse Brain, Mouse Brain

Apoe ISH: Mus musculus, Male, P56, coronal

apolipoprotein E, entrez_id: 11816, Experiment: 79490110, C57BL/6J

Studies: Developing Mouse Brain, Mouse Brain

Fstl1 ISH: Mus musculus, Male, P56, sagittal

follistatin-like 1, entrez_id: 14314, Experiment: 68633050, C57BL/6J

Studies: Developing Mouse Brain, Mouse Brain

Egfr ISH: Mus musculus, Male, P56, sagittal

Egfr, Experiment: 1702, C57BL/6J, Failed QC

Studies: Developing Mouse Brain, Mouse Brain

Wnt1 ISH: Mus musculus, Male, P56, coronal

Wnt1, Experiment: 112644522, C57BL/6J

Studies: Developing Mouse Brain, Mouse Brain

Rnf14 ISH: Mus musculus, Male, P56, sagittal

ring finger protein 14, entrez_id: 56736, Experiment: 69013560, C57BL/6J

Studies: Developing Mouse Brain, Mouse Brain

L1cam ISH: Mus musculus, Male, P56, coronal

L1cam, Experiment: 620, C57BL/6J

Studies: Developing Mouse Brain, Mouse Brain

Tcf4 ISH: Mus musculus, Male, P56, sagittal

Tcf4, Experiment: 1045, C57BL/6J

Studies: Developing Mouse Brain, Mouse Brain

Foxo1 ISH: Mus musculus, Male, P56, coronal

forkhead box O1, entrez_id: 56458, Experiment: 71249055, C57BL/6J

Studies: Developing Mouse Brain, Mouse Brain

Nkx2-9 ISH: Mus musculus, Male, P56, sagittal

NK2 homeobox 9, entrez_id: 18094, Experiment: 75934936, C57BL/6J

Studies: Developing Mouse Brain, Mouse Brain

P2rx4 ISH: Mus musculus, Male, P56, coronal

"purinergic receptor P2X, ligand-gated ion channel 4", entrez_id: 18438, Experiment: 75551474, C57BL/6J

Studies: Developing Mouse Brain, Mouse Brain

	Prenatal (9896)
	Juvenile (57411)
	Adult (116514)
	Aged (32659)

	FISH (300)
	ISH (137378)
	Microarray (290)
	RNA Sequencing (26216)
	Resource (5)

	Aging Dementia TBI - ISH data (1570)
	Aging Dementia TBI - non-ISH data (109)
	Developing Human Brain ISH (3941)
	Developing Human Prenatal LMD Microarray (243)
	Developing Human Reference Data (163)
	Developing Human Transcriptome (285)
	Developing Mouse Brain (21463)
	Glioblastoma (20203)
	Human Brain ISH Autism Study (528)
	Human Brain ISH Cortex Study (6670)
	Human Brain ISH Neurotransmitter Study (11670)
	Human Brain ISH Schizophrenia Study (3378)
	Human Brain ISH SubCortex Study (462)
	Human Brain Microarray (88)
	Human Glioblastoma RNASeq (26085)
	Mouse Brain (28886)
	Mouse Brain Reference Data (1)
	Mouse Cell Types - transcriptomics data (112)
	Mouse Connectivity Projection (1)
	Mouse Connectivity Transgenic Characterization (1850)
	Mouse Spinal Cord (36698)
	Mouse Strains (1080)
	Non-Human Primate ISH (3057)
	Non-Human Primate Macrodissection Microarray (65)
	Non-Human Primate Microdissection Microarray (82)
	Non-Human Primate Molecular Map (133)
	Sleep (1727)

	129/SvJ (10)
	129S1/SvlmJ (124)
	B6.129 (374)
	B6.129.FVB (39)
	B6.C3H (17)
	B6.FVB (35)
	B6.FVB(ICR) (37)
	B6;CFW (2)
	B6;ICR (2)
	C57BL/6J (85098)
	CAST/EiJ (124)
	DBA/2J (124)
	FVB (23)
	FVB.CD1(ICR) (14)
	FVB/NJ (8)
	PWD/PhJ (93)
	SPRET/EiJ (124)
	WSB/EiJ (93)
	ai2/thcre (1)
	ctgf-cre (2)
	wfs1-creer (2)

	Asian (339)
	Black or African American (8233)
	European (122)
	Hispanic (4125)
	Two or more races (122)
	White or Caucasian (14290)

	Dorsal to Ventral (1096)
	Lateral to Medial (3332)
	Medial to Lateral (5219)
	Ventral to Dorsal (7134)
	coronal (27597)
	sagittal (43609)
	variable (38372)

	autism (258)
	control (26146)
	glioblastoma (32400)
	schizophrenia (1231)
	traumatic brain injury (762)

	Amygdala/Hippocampus (1914)
	Brain (1981)
	Brainstem (43)
	Cerebellum (43)
	Cingulate Cortex (2843)
	Claustrum/Insula (1229)
	Dorsolateral prefrontal cortex (3824)
	Frontal Cortex (4049)
	Parieto-Occipital Cortex (2201)
	Posterior Superior Temporal Cortex (37)
	SubCortex (1144)
	Temporal cortex (3392)
	Ventral Anterior Cingulate (20)
	Ventral striatum (788)
	Visual Cortex (802)
	Visual cortex (3303)
	amygdaloid complex (576)
	brain (173)
	frontal lobe (5823)
	hippocampal cortex (hippocampal formation) (579)
	hippocampus (hippocampal formation) (522)
	medial frontal cortex (areas 24 25 and 32) (576)
	medial prefrontal cortex (715)
	occipital cortex (576)
	occipital lobe (955)
	parietal lobe (7171)
	parietal neocortex (498)
	temporal lobe (5774)
	temporal neocortex (550)
	ventral striatum (576)

	Human (74689)
	Mouse (87459)
	NHP (3204)

	Female (44466)
	Male (141492)

	Passed QC (160928)
	Failed QC (4424)