Allen Brain Atlas

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Kcng4 ISH: Mus musculus, Male, P56, coronal "potassium voltage-gated channel, subfamily G, member 4", entrez_id: 66733, Experiment: 72081560, C57BL/6J Studies: Developing Mouse Brain, Mouse Brain
Calb1 ISH: Mus musculus, Male, P56, sagittal Calb1, Experiment: 1167, C57BL/6J, Failed QC Studies: Developing Mouse Brain, Mouse Brain
Rora ISH: Mus musculus, Male, P56, coronal RAR-related orphan receptor alpha, entrez_id: 19883, Experiment: 79488937, C57BL/6J Studies: Developing Mouse Brain, Mouse Brain
Lrp5 ISH: Mus musculus, Male, P56, coronal low density lipoprotein receptor-related protein 5, entrez_id: 16973, Experiment: 79556646, C57BL/6J Studies: Developing Mouse Brain, Mouse Brain
Tsc1 ISH: Mus musculus, Male, P56, sagittal tuberous sclerosis 1, entrez_id: 64930, Experiment: 71152378, C57BL/6J Studies: Developing Mouse Brain, Mouse Brain
Lef1 ISH: Mus musculus, Male, P56, sagittal Lef1, Experiment: 632, C57BL/6J Studies: Developing Mouse Brain, Mouse Brain
Elk4 ISH: Mus musculus, Male, P56, sagittal "ELK4, member of ETS oncogene family", entrez_id: 13714, Experiment: 69288938, C57BL/6J Studies: Developing Mouse Brain, Mouse Brain
Tcf12 ISH: Mus musculus, Male, P56, sagittal transcription factor 12, entrez_id: 21406, Experiment: 69549664, C57BL/6J Studies: Developing Mouse Brain, Mouse Brain
Ntm ISH: Mus musculus, Male, P56, coronal Ntm, Experiment: 573, C57BL/6J Studies: Developing Mouse Brain, Mouse Brain
Nr1h4 ISH: Mus musculus, Male, P56, sagittal "nuclear receptor subfamily 1, group H, member 4", entrez_id: 20186, Experiment: 77455032, C57BL/6J Studies: Developing Mouse Brain, Mouse Brain
Gpr139 ISH: Mus musculus, Male, P56, sagittal G protein-coupled receptor 139, entrez_id: 209776, Experiment: 69257450, C57BL/6J, Failed QC Studies: Developing Mouse Brain, Mouse Brain
Efna1 ISH: Mus musculus, Male, P56, sagittal Efna1, Experiment: 100146085, C57BL/6J, Failed QC Studies: Developing Mouse Brain, Mouse Brain
Pomc ISH: Mus musculus, Male, P56, coronal Pomc, Experiment: 2493, C57BL/6J Studies: Developing Mouse Brain, Mouse Brain
Oprk1 ISH: Mus musculus, Male, P56, coronal "opioid receptor, kappa 1", entrez_id: 18387, Experiment: 80517217, C57BL/6J Studies: Developing Mouse Brain, Mouse Brain
Hoxb4 ISH: Mus musculus, Male, P56, sagittal homeobox B4, entrez_id: 15412, Experiment: 76081918, C57BL/6J Studies: Developing Mouse Brain, Mouse Brain
Map3k7 ISH: Mus musculus, Male, P56, coronal Map3k7, Experiment: 2393, C57BL/6J Studies: Developing Mouse Brain, Mouse Brain
Cdh10 ISH: Mus musculus, Male, P56, sagittal cadherin 10, entrez_id: 320873, Experiment: 68861921, C57BL/6J, Failed QC Studies: Developing Mouse Brain, Mouse Brain
Stat1 ISH: Mus musculus, Male, P56, coronal Stat1, Experiment: 2635, C57BL/6J Studies: Developing Mouse Brain, Mouse Brain
Efnb2 ISH: Mus musculus, Male, P56, sagittal ephrin B2, entrez_id: 13642, Experiment: 70813221, C57BL/6J, Failed QC Studies: Developing Mouse Brain, Mouse Brain
Nfib ISH: Mus musculus, Male, P56, sagittal Nfib, Experiment: 703, C57BL/6J, Failed QC Studies: Developing Mouse Brain, Mouse Brain
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Kcng4 ISH: Mus musculus, Male, P56, coronal

"potassium voltage-gated channel, subfamily G, member 4", entrez_id: 66733, Experiment: 72081560, C57BL/6J

Studies: Developing Mouse Brain, Mouse Brain

Calb1 ISH: Mus musculus, Male, P56, sagittal

Calb1, Experiment: 1167, C57BL/6J, Failed QC

Studies: Developing Mouse Brain, Mouse Brain

Rora ISH: Mus musculus, Male, P56, coronal

RAR-related orphan receptor alpha, entrez_id: 19883, Experiment: 79488937, C57BL/6J

Studies: Developing Mouse Brain, Mouse Brain

Lrp5 ISH: Mus musculus, Male, P56, coronal

low density lipoprotein receptor-related protein 5, entrez_id: 16973, Experiment: 79556646, C57BL/6J

Studies: Developing Mouse Brain, Mouse Brain

Tsc1 ISH: Mus musculus, Male, P56, sagittal

tuberous sclerosis 1, entrez_id: 64930, Experiment: 71152378, C57BL/6J

Studies: Developing Mouse Brain, Mouse Brain

Lef1 ISH: Mus musculus, Male, P56, sagittal

Lef1, Experiment: 632, C57BL/6J

Studies: Developing Mouse Brain, Mouse Brain

Elk4 ISH: Mus musculus, Male, P56, sagittal

"ELK4, member of ETS oncogene family", entrez_id: 13714, Experiment: 69288938, C57BL/6J

Studies: Developing Mouse Brain, Mouse Brain

Tcf12 ISH: Mus musculus, Male, P56, sagittal

transcription factor 12, entrez_id: 21406, Experiment: 69549664, C57BL/6J

Studies: Developing Mouse Brain, Mouse Brain

Ntm ISH: Mus musculus, Male, P56, coronal

Ntm, Experiment: 573, C57BL/6J

Studies: Developing Mouse Brain, Mouse Brain

Nr1h4 ISH: Mus musculus, Male, P56, sagittal

"nuclear receptor subfamily 1, group H, member 4", entrez_id: 20186, Experiment: 77455032, C57BL/6J

Studies: Developing Mouse Brain, Mouse Brain

Gpr139 ISH: Mus musculus, Male, P56, sagittal

G protein-coupled receptor 139, entrez_id: 209776, Experiment: 69257450, C57BL/6J, Failed QC

Studies: Developing Mouse Brain, Mouse Brain

Efna1 ISH: Mus musculus, Male, P56, sagittal

Efna1, Experiment: 100146085, C57BL/6J, Failed QC

Studies: Developing Mouse Brain, Mouse Brain

Pomc ISH: Mus musculus, Male, P56, coronal

Pomc, Experiment: 2493, C57BL/6J

Studies: Developing Mouse Brain, Mouse Brain

Oprk1 ISH: Mus musculus, Male, P56, coronal

"opioid receptor, kappa 1", entrez_id: 18387, Experiment: 80517217, C57BL/6J

Studies: Developing Mouse Brain, Mouse Brain

Hoxb4 ISH: Mus musculus, Male, P56, sagittal

homeobox B4, entrez_id: 15412, Experiment: 76081918, C57BL/6J

Studies: Developing Mouse Brain, Mouse Brain

Map3k7 ISH: Mus musculus, Male, P56, coronal

Map3k7, Experiment: 2393, C57BL/6J

Studies: Developing Mouse Brain, Mouse Brain

Cdh10 ISH: Mus musculus, Male, P56, sagittal

cadherin 10, entrez_id: 320873, Experiment: 68861921, C57BL/6J, Failed QC

Studies: Developing Mouse Brain, Mouse Brain

Stat1 ISH: Mus musculus, Male, P56, coronal

Stat1, Experiment: 2635, C57BL/6J

Studies: Developing Mouse Brain, Mouse Brain

Efnb2 ISH: Mus musculus, Male, P56, sagittal

ephrin B2, entrez_id: 13642, Experiment: 70813221, C57BL/6J, Failed QC

Studies: Developing Mouse Brain, Mouse Brain

Nfib ISH: Mus musculus, Male, P56, sagittal

Nfib, Experiment: 703, C57BL/6J, Failed QC

Studies: Developing Mouse Brain, Mouse Brain

	Prenatal (9896)
	Juvenile (57411)
	Adult (116514)
	Aged (32659)

	FISH (300)
	ISH (137378)
	Microarray (290)
	RNA Sequencing (26216)
	Resource (5)

	Aging Dementia TBI - ISH data (1570)
	Aging Dementia TBI - non-ISH data (109)
	Developing Human Brain ISH (3941)
	Developing Human Prenatal LMD Microarray (243)
	Developing Human Reference Data (163)
	Developing Human Transcriptome (285)
	Developing Mouse Brain (21463)
	Glioblastoma (20203)
	Human Brain ISH Autism Study (528)
	Human Brain ISH Cortex Study (6670)
	Human Brain ISH Neurotransmitter Study (11670)
	Human Brain ISH Schizophrenia Study (3378)
	Human Brain ISH SubCortex Study (462)
	Human Brain Microarray (88)
	Human Glioblastoma RNASeq (26085)
	Mouse Brain (28886)
	Mouse Brain Reference Data (1)
	Mouse Cell Types - transcriptomics data (112)
	Mouse Connectivity Projection (1)
	Mouse Connectivity Transgenic Characterization (1850)
	Mouse Spinal Cord (36698)
	Mouse Strains (1080)
	Non-Human Primate ISH (3057)
	Non-Human Primate Macrodissection Microarray (65)
	Non-Human Primate Microdissection Microarray (82)
	Non-Human Primate Molecular Map (133)
	Sleep (1727)

	129/SvJ (10)
	129S1/SvlmJ (124)
	B6.129 (374)
	B6.129.FVB (39)
	B6.C3H (17)
	B6.FVB (35)
	B6.FVB(ICR) (37)
	B6;CFW (2)
	B6;ICR (2)
	C57BL/6J (85098)
	CAST/EiJ (124)
	DBA/2J (124)
	FVB (23)
	FVB.CD1(ICR) (14)
	FVB/NJ (8)
	PWD/PhJ (93)
	SPRET/EiJ (124)
	WSB/EiJ (93)
	ai2/thcre (1)
	ctgf-cre (2)
	wfs1-creer (2)

	Asian (339)
	Black or African American (8233)
	European (122)
	Hispanic (4125)
	Two or more races (122)
	White or Caucasian (14290)

	Dorsal to Ventral (1096)
	Lateral to Medial (3332)
	Medial to Lateral (5219)
	Ventral to Dorsal (7134)
	coronal (27597)
	sagittal (43609)
	variable (38372)

	autism (258)
	control (26146)
	glioblastoma (32400)
	schizophrenia (1231)
	traumatic brain injury (762)

	Amygdala/Hippocampus (1914)
	Brain (1981)
	Brainstem (43)
	Cerebellum (43)
	Cingulate Cortex (2843)
	Claustrum/Insula (1229)
	Dorsolateral prefrontal cortex (3824)
	Frontal Cortex (4049)
	Parieto-Occipital Cortex (2201)
	Posterior Superior Temporal Cortex (37)
	SubCortex (1144)
	Temporal cortex (3392)
	Ventral Anterior Cingulate (20)
	Ventral striatum (788)
	Visual Cortex (802)
	Visual cortex (3303)
	amygdaloid complex (576)
	brain (173)
	frontal lobe (5823)
	hippocampal cortex (hippocampal formation) (579)
	hippocampus (hippocampal formation) (522)
	medial frontal cortex (areas 24 25 and 32) (576)
	medial prefrontal cortex (715)
	occipital cortex (576)
	occipital lobe (955)
	parietal lobe (7171)
	parietal neocortex (498)
	temporal lobe (5774)
	temporal neocortex (550)
	ventral striatum (576)

	Human (74689)
	Mouse (87459)
	NHP (3204)

	Female (44466)
	Male (141492)

	Passed QC (160928)
	Failed QC (4424)