Allen Brain Atlas

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Crh ISH: Mus musculus, Male, P56, coronal Crh, Experiment: 292, C57BL/6J Studies: Developing Mouse Brain, Mouse Brain
Pvalb ISH: Mus musculus, Male, P56, sagittal Pvalb, Experiment: 869, C57BL/6J Studies: Developing Mouse Brain, Mouse Brain
Foxh1 ISH: Mus musculus, Male, P56, sagittal forkhead box H1, entrez_id: 14106, Experiment: 71307322, C57BL/6J Studies: Developing Mouse Brain, Mouse Brain
Stat4 ISH: Mus musculus, Male, P56, sagittal signal transducer and activator of transcription 4, entrez_id: 20849, Experiment: 70593391, C57BL/6J Studies: Developing Mouse Brain, Mouse Brain
Dkk3 ISH: Mus musculus, Male, P56, sagittal dickkopf homolog 3 (Xenopus laevis), entrez_id: 50781, Experiment: 75492876, C57BL/6J Studies: Developing Mouse Brain, Mouse Brain
Clu ISH: Mus musculus, Male, P56, coronal Clu, Experiment: 275, C57BL/6J Studies: Developing Mouse Brain, Mouse Brain
Pou2f2 ISH: Mus musculus, Male, P56, sagittal "POU domain, class 2, transcription factor 2", entrez_id: 18987, Experiment: 75214820, C57BL/6J, Failed QC Studies: Developing Mouse Brain, Mouse Brain
Adcyap1 ISH: Mus musculus, Male, P56, sagittal adenylate cyclase activating polypeptide 1, entrez_id: 11516, Experiment: 70523740, C57BL/6J Studies: Developing Mouse Brain, Mouse Brain
Mesp2 ISH: Mus musculus, Male, P56, sagittal mesoderm posterior 2, entrez_id: 17293, Experiment: 69289345, C57BL/6J Studies: Developing Mouse Brain, Mouse Brain
Fam189a2 ISH: Mus musculus, Male, P56, coronal "family with sequence similarity 189, member A2", entrez_id: 381217, Experiment: 73512353, C57BL/6J Studies: Developing Mouse Brain, Mouse Brain
Lmtk2 ISH: Mus musculus, Male, P56, sagittal lemur tyrosine kinase 2, entrez_id: 231876, Experiment: 69736148, C57BL/6J Studies: Developing Mouse Brain, Mouse Brain
Akt1 ISH: Mus musculus, Male, P56, sagittal thymoma viral proto-oncogene 1, entrez_id: 11651, Experiment: 75988255, C57BL/6J Studies: Developing Mouse Brain, Mouse Brain
Cox6a2 ISH: Mus musculus, Male, P56, sagittal cytochrome c oxidase subunit VIa polypeptide 2, entrez_id: 12862, Experiment: 68545650, C57BL/6J Studies: Developing Mouse Brain, Mouse Brain
Hsd11b1 ISH: Mus musculus, Male, P56, sagittal hydroxysteroid 11-beta dehydrogenase 1, entrez_id: 15483, Experiment: 69735114, C57BL/6J, Failed QC Studies: Developing Mouse Brain, Mouse Brain
Mesdc2 ISH: Mus musculus, Male, P56, sagittal mesoderm development candidate 2, entrez_id: 67943, Experiment: 69015464, C57BL/6J Studies: Developing Mouse Brain, Mouse Brain
Jund ISH: Mus musculus, Male, P56, coronal Jund, Experiment: 606, C57BL/6J Studies: Developing Mouse Brain, Mouse Brain
Cnp ISH: Mus musculus, Male, P56, coronal "2',3'-cyclic nucleotide 3' phosphodiesterase", entrez_id: 12799, Experiment: 79488913, C57BL/6J Studies: Developing Mouse Brain, Mouse Brain
Gpr37l1 ISH: Mus musculus, Male, P56, coronal G protein-coupled receptor 37-like 1, entrez_id: 171469, Experiment: 74724670, C57BL/6J Studies: Developing Mouse Brain, Mouse Brain
Th ISH: Mus musculus, Male, P56, coronal Th, Experiment: 1056, C57BL/6J Studies: Developing Mouse Brain, Mouse Brain
Trps1 ISH: Mus musculus, Male, P56, sagittal Trps1, Experiment: 2698, C57BL/6J Studies: Developing Mouse Brain, Mouse Brain
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Crh ISH: Mus musculus, Male, P56, coronal

Crh, Experiment: 292, C57BL/6J

Studies: Developing Mouse Brain, Mouse Brain

Pvalb ISH: Mus musculus, Male, P56, sagittal

Pvalb, Experiment: 869, C57BL/6J

Studies: Developing Mouse Brain, Mouse Brain

Foxh1 ISH: Mus musculus, Male, P56, sagittal

forkhead box H1, entrez_id: 14106, Experiment: 71307322, C57BL/6J

Studies: Developing Mouse Brain, Mouse Brain

Stat4 ISH: Mus musculus, Male, P56, sagittal

signal transducer and activator of transcription 4, entrez_id: 20849, Experiment: 70593391, C57BL/6J

Studies: Developing Mouse Brain, Mouse Brain

Dkk3 ISH: Mus musculus, Male, P56, sagittal

dickkopf homolog 3 (Xenopus laevis), entrez_id: 50781, Experiment: 75492876, C57BL/6J

Studies: Developing Mouse Brain, Mouse Brain

Clu ISH: Mus musculus, Male, P56, coronal

Clu, Experiment: 275, C57BL/6J

Studies: Developing Mouse Brain, Mouse Brain

Pou2f2 ISH: Mus musculus, Male, P56, sagittal

"POU domain, class 2, transcription factor 2", entrez_id: 18987, Experiment: 75214820, C57BL/6J, Failed QC

Studies: Developing Mouse Brain, Mouse Brain

Adcyap1 ISH: Mus musculus, Male, P56, sagittal

adenylate cyclase activating polypeptide 1, entrez_id: 11516, Experiment: 70523740, C57BL/6J

Studies: Developing Mouse Brain, Mouse Brain

Mesp2 ISH: Mus musculus, Male, P56, sagittal

mesoderm posterior 2, entrez_id: 17293, Experiment: 69289345, C57BL/6J

Studies: Developing Mouse Brain, Mouse Brain

Fam189a2 ISH: Mus musculus, Male, P56, coronal

"family with sequence similarity 189, member A2", entrez_id: 381217, Experiment: 73512353, C57BL/6J

Studies: Developing Mouse Brain, Mouse Brain

Lmtk2 ISH: Mus musculus, Male, P56, sagittal

lemur tyrosine kinase 2, entrez_id: 231876, Experiment: 69736148, C57BL/6J

Studies: Developing Mouse Brain, Mouse Brain

Akt1 ISH: Mus musculus, Male, P56, sagittal

thymoma viral proto-oncogene 1, entrez_id: 11651, Experiment: 75988255, C57BL/6J

Studies: Developing Mouse Brain, Mouse Brain

Cox6a2 ISH: Mus musculus, Male, P56, sagittal

cytochrome c oxidase subunit VIa polypeptide 2, entrez_id: 12862, Experiment: 68545650, C57BL/6J

Studies: Developing Mouse Brain, Mouse Brain

Hsd11b1 ISH: Mus musculus, Male, P56, sagittal

hydroxysteroid 11-beta dehydrogenase 1, entrez_id: 15483, Experiment: 69735114, C57BL/6J, Failed QC

Studies: Developing Mouse Brain, Mouse Brain

Mesdc2 ISH: Mus musculus, Male, P56, sagittal

mesoderm development candidate 2, entrez_id: 67943, Experiment: 69015464, C57BL/6J

Studies: Developing Mouse Brain, Mouse Brain

Jund ISH: Mus musculus, Male, P56, coronal

Jund, Experiment: 606, C57BL/6J

Studies: Developing Mouse Brain, Mouse Brain

Cnp ISH: Mus musculus, Male, P56, coronal

"2',3'-cyclic nucleotide 3' phosphodiesterase", entrez_id: 12799, Experiment: 79488913, C57BL/6J

Studies: Developing Mouse Brain, Mouse Brain

Gpr37l1 ISH: Mus musculus, Male, P56, coronal

G protein-coupled receptor 37-like 1, entrez_id: 171469, Experiment: 74724670, C57BL/6J

Studies: Developing Mouse Brain, Mouse Brain

Th ISH: Mus musculus, Male, P56, coronal

Th, Experiment: 1056, C57BL/6J

Studies: Developing Mouse Brain, Mouse Brain

Trps1 ISH: Mus musculus, Male, P56, sagittal

Trps1, Experiment: 2698, C57BL/6J

Studies: Developing Mouse Brain, Mouse Brain

	Prenatal (9896)
	Juvenile (57411)
	Adult (116514)
	Aged (32659)

	FISH (300)
	ISH (137378)
	Microarray (290)
	RNA Sequencing (26216)
	Resource (5)

	Aging Dementia TBI - ISH data (1570)
	Aging Dementia TBI - non-ISH data (109)
	Developing Human Brain ISH (3941)
	Developing Human Prenatal LMD Microarray (243)
	Developing Human Reference Data (163)
	Developing Human Transcriptome (285)
	Developing Mouse Brain (21463)
	Glioblastoma (20203)
	Human Brain ISH Autism Study (528)
	Human Brain ISH Cortex Study (6670)
	Human Brain ISH Neurotransmitter Study (11670)
	Human Brain ISH Schizophrenia Study (3378)
	Human Brain ISH SubCortex Study (462)
	Human Brain Microarray (88)
	Human Glioblastoma RNASeq (26085)
	Mouse Brain (28886)
	Mouse Brain Reference Data (1)
	Mouse Cell Types - transcriptomics data (112)
	Mouse Connectivity Projection (1)
	Mouse Connectivity Transgenic Characterization (1850)
	Mouse Spinal Cord (36698)
	Mouse Strains (1080)
	Non-Human Primate ISH (3057)
	Non-Human Primate Macrodissection Microarray (65)
	Non-Human Primate Microdissection Microarray (82)
	Non-Human Primate Molecular Map (133)
	Sleep (1727)

	129/SvJ (10)
	129S1/SvlmJ (124)
	B6.129 (374)
	B6.129.FVB (39)
	B6.C3H (17)
	B6.FVB (35)
	B6.FVB(ICR) (37)
	B6;CFW (2)
	B6;ICR (2)
	C57BL/6J (85098)
	CAST/EiJ (124)
	DBA/2J (124)
	FVB (23)
	FVB.CD1(ICR) (14)
	FVB/NJ (8)
	PWD/PhJ (93)
	SPRET/EiJ (124)
	WSB/EiJ (93)
	ai2/thcre (1)
	ctgf-cre (2)
	wfs1-creer (2)

	Asian (339)
	Black or African American (8233)
	European (122)
	Hispanic (4125)
	Two or more races (122)
	White or Caucasian (14290)

	Dorsal to Ventral (1096)
	Lateral to Medial (3332)
	Medial to Lateral (5219)
	Ventral to Dorsal (7134)
	coronal (27597)
	sagittal (43609)
	variable (38372)

	autism (258)
	control (26146)
	glioblastoma (32400)
	schizophrenia (1231)
	traumatic brain injury (762)

	Amygdala/Hippocampus (1914)
	Brain (1981)
	Brainstem (43)
	Cerebellum (43)
	Cingulate Cortex (2843)
	Claustrum/Insula (1229)
	Dorsolateral prefrontal cortex (3824)
	Frontal Cortex (4049)
	Parieto-Occipital Cortex (2201)
	Posterior Superior Temporal Cortex (37)
	SubCortex (1144)
	Temporal cortex (3392)
	Ventral Anterior Cingulate (20)
	Ventral striatum (788)
	Visual Cortex (802)
	Visual cortex (3303)
	amygdaloid complex (576)
	brain (173)
	frontal lobe (5823)
	hippocampal cortex (hippocampal formation) (579)
	hippocampus (hippocampal formation) (522)
	medial frontal cortex (areas 24 25 and 32) (576)
	medial prefrontal cortex (715)
	occipital cortex (576)
	occipital lobe (955)
	parietal lobe (7171)
	parietal neocortex (498)
	temporal lobe (5774)
	temporal neocortex (550)
	ventral striatum (576)

	Human (74689)
	Mouse (87459)
	NHP (3204)

	Female (44466)
	Male (141492)

	Passed QC (160928)
	Failed QC (4424)