Allen Brain Atlas

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Scn5a ISH: Mus musculus, Male, P56, coronal "sodium channel, voltage-gated, type V, alpha", entrez_id: 20271, Experiment: 73907501, C57BL/6J Studies: Developing Mouse Brain, Mouse Brain
Dlx1 ISH: Mus musculus, Male, P56, coronal Dlx1, Experiment: 348, C57BL/6J Studies: Developing Mouse Brain, Mouse Brain
Tead1 ISH: Mus musculus, Male, P56, sagittal TEA domain family member 1, entrez_id: 21676, Experiment: 68843829, C57BL/6J Studies: Developing Mouse Brain, Mouse Brain
Fgf7 ISH: Mus musculus, Male, P56, sagittal fibroblast growth factor 7, entrez_id: 14178, Experiment: 77454720, C57BL/6J Studies: Developing Mouse Brain, Mouse Brain
Cd24a ISH: Mus musculus, Male, P56, coronal CD24a antigen, entrez_id: 12484, Experiment: 73787950, C57BL/6J, Failed QC Studies: Developing Mouse Brain, Mouse Brain
Dll4 ISH: Mus musculus, Male, P56, sagittal Dll4, Experiment: 100144503, C57BL/6J Studies: Developing Mouse Brain, Mouse Brain
Rbpj ISH: Mus musculus, Male, P56, sagittal recombination signal binding protein for immunoglobulin kappa J region, entrez_id: 19664, Experiment: 69262324, C57BL/6J Studies: Developing Mouse Brain, Mouse Brain
Zfpm2 ISH: Mus musculus, Male, P56, sagittal "zinc finger protein, multitype 2", entrez_id: 22762, Experiment: 68844504, C57BL/6J Studies: Developing Mouse Brain, Mouse Brain
Kcnc2 ISH: Mus musculus, Male, P56, sagittal "potassium voltage gated channel, Shaw-related subfamily, member 2", entrez_id: 268345, Experiment: 74431499, C57BL/6J, Failed QC Studies: Developing Mouse Brain, Mouse Brain
Wnt11 ISH: Mus musculus, Male, P56, sagittal "wingless-type MMTV integration site family, member 11", entrez_id: 22411, Experiment: 81600580, C57BL/6J Studies: Developing Mouse Brain, Mouse Brain
Dusp14 ISH: Mus musculus, Male, P56, sagittal dual specificity phosphatase 14, entrez_id: 56405, Experiment: 74003397, C57BL/6J, Failed QC Studies: Developing Mouse Brain, Mouse Brain
Tead1 ISH: Mus musculus, Male, P56, sagittal TEA domain family member 1, entrez_id: 21676, Experiment: 77791782, C57BL/6J Studies: Developing Mouse Brain, Mouse Brain
Hspb8 ISH: Mus musculus, Male, P56, coronal heat shock protein 8, entrez_id: 80888, Experiment: 77866850, C57BL/6J Studies: Developing Mouse Brain, Mouse Brain
Wnt16 ISH: Mus musculus, Male, P56, sagittal Wnt16, Experiment: 2730, C57BL/6J, Failed QC Studies: Developing Mouse Brain, Mouse Brain
App ISH: Mus musculus, Male, P56, coronal amyloid beta (A4) precursor protein, entrez_id: 11820, Experiment: 79591705, C57BL/6J Studies: Developing Mouse Brain, Mouse Brain
Parm1 ISH: Mus musculus, Male, P56, coronal prostate androgen-regulated mucin-like protein 1, entrez_id: 231440, Experiment: 73817926, C57BL/6J, Failed QC Studies: Developing Mouse Brain, Mouse Brain
Disc1 ISH: Mus musculus, Male, P56, sagittal disrupted in schizophrenia 1, entrez_id: 244667, Experiment: 70238872, C57BL/6J, Failed QC Studies: Developing Mouse Brain, Mouse Brain
Crh ISH: Mus musculus, Male, P56, sagittal Crh, Experiment: 293, C57BL/6J Studies: Developing Mouse Brain, Mouse Brain
Hmx2 ISH: Mus musculus, Male, P56, sagittal H6 homeobox 2, entrez_id: 15372, Experiment: 68203440, C57BL/6J Studies: Developing Mouse Brain, Mouse Brain
Pou2f2 ISH: Mus musculus, Male, P56, sagittal "POU domain, class 2, transcription factor 2", entrez_id: 18987, Experiment: 75692904, C57BL/6J, Failed QC Studies: Developing Mouse Brain, Mouse Brain
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Scn5a ISH: Mus musculus, Male, P56, coronal

"sodium channel, voltage-gated, type V, alpha", entrez_id: 20271, Experiment: 73907501, C57BL/6J

Studies: Developing Mouse Brain, Mouse Brain

Dlx1 ISH: Mus musculus, Male, P56, coronal

Dlx1, Experiment: 348, C57BL/6J

Studies: Developing Mouse Brain, Mouse Brain

Tead1 ISH: Mus musculus, Male, P56, sagittal

TEA domain family member 1, entrez_id: 21676, Experiment: 68843829, C57BL/6J

Studies: Developing Mouse Brain, Mouse Brain

Fgf7 ISH: Mus musculus, Male, P56, sagittal

fibroblast growth factor 7, entrez_id: 14178, Experiment: 77454720, C57BL/6J

Studies: Developing Mouse Brain, Mouse Brain

Cd24a ISH: Mus musculus, Male, P56, coronal

CD24a antigen, entrez_id: 12484, Experiment: 73787950, C57BL/6J, Failed QC

Studies: Developing Mouse Brain, Mouse Brain

Dll4 ISH: Mus musculus, Male, P56, sagittal

Dll4, Experiment: 100144503, C57BL/6J

Studies: Developing Mouse Brain, Mouse Brain

Rbpj ISH: Mus musculus, Male, P56, sagittal

recombination signal binding protein for immunoglobulin kappa J region, entrez_id: 19664, Experiment: 69262324, C57BL/6J

Studies: Developing Mouse Brain, Mouse Brain

Zfpm2 ISH: Mus musculus, Male, P56, sagittal

"zinc finger protein, multitype 2", entrez_id: 22762, Experiment: 68844504, C57BL/6J

Studies: Developing Mouse Brain, Mouse Brain

Kcnc2 ISH: Mus musculus, Male, P56, sagittal

"potassium voltage gated channel, Shaw-related subfamily, member 2", entrez_id: 268345, Experiment: 74431499, C57BL/6J, Failed QC

Studies: Developing Mouse Brain, Mouse Brain

Wnt11 ISH: Mus musculus, Male, P56, sagittal

"wingless-type MMTV integration site family, member 11", entrez_id: 22411, Experiment: 81600580, C57BL/6J

Studies: Developing Mouse Brain, Mouse Brain

Dusp14 ISH: Mus musculus, Male, P56, sagittal

dual specificity phosphatase 14, entrez_id: 56405, Experiment: 74003397, C57BL/6J, Failed QC

Studies: Developing Mouse Brain, Mouse Brain

Tead1 ISH: Mus musculus, Male, P56, sagittal

TEA domain family member 1, entrez_id: 21676, Experiment: 77791782, C57BL/6J

Studies: Developing Mouse Brain, Mouse Brain

Hspb8 ISH: Mus musculus, Male, P56, coronal

heat shock protein 8, entrez_id: 80888, Experiment: 77866850, C57BL/6J

Studies: Developing Mouse Brain, Mouse Brain

Wnt16 ISH: Mus musculus, Male, P56, sagittal

Wnt16, Experiment: 2730, C57BL/6J, Failed QC

Studies: Developing Mouse Brain, Mouse Brain

App ISH: Mus musculus, Male, P56, coronal

amyloid beta (A4) precursor protein, entrez_id: 11820, Experiment: 79591705, C57BL/6J

Studies: Developing Mouse Brain, Mouse Brain

Parm1 ISH: Mus musculus, Male, P56, coronal

prostate androgen-regulated mucin-like protein 1, entrez_id: 231440, Experiment: 73817926, C57BL/6J, Failed QC

Studies: Developing Mouse Brain, Mouse Brain

Disc1 ISH: Mus musculus, Male, P56, sagittal

disrupted in schizophrenia 1, entrez_id: 244667, Experiment: 70238872, C57BL/6J, Failed QC

Studies: Developing Mouse Brain, Mouse Brain

Crh ISH: Mus musculus, Male, P56, sagittal

Crh, Experiment: 293, C57BL/6J

Studies: Developing Mouse Brain, Mouse Brain

Hmx2 ISH: Mus musculus, Male, P56, sagittal

H6 homeobox 2, entrez_id: 15372, Experiment: 68203440, C57BL/6J

Studies: Developing Mouse Brain, Mouse Brain

Pou2f2 ISH: Mus musculus, Male, P56, sagittal

"POU domain, class 2, transcription factor 2", entrez_id: 18987, Experiment: 75692904, C57BL/6J, Failed QC

Studies: Developing Mouse Brain, Mouse Brain

	Prenatal (9896)
	Juvenile (57411)
	Adult (116514)
	Aged (32659)

	FISH (300)
	ISH (137378)
	Microarray (290)
	RNA Sequencing (26216)
	Resource (5)

	Aging Dementia TBI - ISH data (1570)
	Aging Dementia TBI - non-ISH data (109)
	Developing Human Brain ISH (3941)
	Developing Human Prenatal LMD Microarray (243)
	Developing Human Reference Data (163)
	Developing Human Transcriptome (285)
	Developing Mouse Brain (21463)
	Glioblastoma (20203)
	Human Brain ISH Autism Study (528)
	Human Brain ISH Cortex Study (6670)
	Human Brain ISH Neurotransmitter Study (11670)
	Human Brain ISH Schizophrenia Study (3378)
	Human Brain ISH SubCortex Study (462)
	Human Brain Microarray (88)
	Human Glioblastoma RNASeq (26085)
	Mouse Brain (28886)
	Mouse Brain Reference Data (1)
	Mouse Cell Types - transcriptomics data (112)
	Mouse Connectivity Projection (1)
	Mouse Connectivity Transgenic Characterization (1850)
	Mouse Spinal Cord (36698)
	Mouse Strains (1080)
	Non-Human Primate ISH (3057)
	Non-Human Primate Macrodissection Microarray (65)
	Non-Human Primate Microdissection Microarray (82)
	Non-Human Primate Molecular Map (133)
	Sleep (1727)

	129/SvJ (10)
	129S1/SvlmJ (124)
	B6.129 (374)
	B6.129.FVB (39)
	B6.C3H (17)
	B6.FVB (35)
	B6.FVB(ICR) (37)
	B6;CFW (2)
	B6;ICR (2)
	C57BL/6J (85098)
	CAST/EiJ (124)
	DBA/2J (124)
	FVB (23)
	FVB.CD1(ICR) (14)
	FVB/NJ (8)
	PWD/PhJ (93)
	SPRET/EiJ (124)
	WSB/EiJ (93)
	ai2/thcre (1)
	ctgf-cre (2)
	wfs1-creer (2)

	Asian (339)
	Black or African American (8233)
	European (122)
	Hispanic (4125)
	Two or more races (122)
	White or Caucasian (14290)

	Dorsal to Ventral (1096)
	Lateral to Medial (3332)
	Medial to Lateral (5219)
	Ventral to Dorsal (7134)
	coronal (27597)
	sagittal (43609)
	variable (38372)

	autism (258)
	control (26146)
	glioblastoma (32400)
	schizophrenia (1231)
	traumatic brain injury (762)

	Amygdala/Hippocampus (1914)
	Brain (1981)
	Brainstem (43)
	Cerebellum (43)
	Cingulate Cortex (2843)
	Claustrum/Insula (1229)
	Dorsolateral prefrontal cortex (3824)
	Frontal Cortex (4049)
	Parieto-Occipital Cortex (2201)
	Posterior Superior Temporal Cortex (37)
	SubCortex (1144)
	Temporal cortex (3392)
	Ventral Anterior Cingulate (20)
	Ventral striatum (788)
	Visual Cortex (802)
	Visual cortex (3303)
	amygdaloid complex (576)
	brain (173)
	frontal lobe (5823)
	hippocampal cortex (hippocampal formation) (579)
	hippocampus (hippocampal formation) (522)
	medial frontal cortex (areas 24 25 and 32) (576)
	medial prefrontal cortex (715)
	occipital cortex (576)
	occipital lobe (955)
	parietal lobe (7171)
	parietal neocortex (498)
	temporal lobe (5774)
	temporal neocortex (550)
	ventral striatum (576)

	Human (74689)
	Mouse (87459)
	NHP (3204)

	Female (44466)
	Male (141492)

	Passed QC (160928)
	Failed QC (4424)