Allen Brain Atlas

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Npy2r ISH: Mus musculus, Male, P56, sagittal neuropeptide Y receptor Y2, entrez_id: 18167, Experiment: 69258196, C57BL/6J Studies: Developing Mouse Brain, Mouse Brain
C4b ISH: Mus musculus, Male, P56, coronal complement component 4B (Chido blood group), entrez_id: 12268, Experiment: 74047758, C57BL/6J Studies: Developing Mouse Brain, Mouse Brain
Lrp5 ISH: Mus musculus, Male, P56, sagittal Lrp5, Experiment: 654, C57BL/6J, Failed QC Studies: Developing Mouse Brain, Mouse Brain
Ptf1a ISH: Mus musculus, Male, P56, sagittal "pancreas specific transcription factor, 1a", entrez_id: 19213, Experiment: 81657673, C57BL/6J Studies: Developing Mouse Brain, Mouse Brain
Cdh9 ISH: Mus musculus, Male, P56, coronal cadherin 9, entrez_id: 12565, Experiment: 72472764, C57BL/6J Studies: Developing Mouse Brain, Mouse Brain
Lmo2 ISH: Mus musculus, Male, P56, sagittal Lmo2, Experiment: 2384, C57BL/6J Studies: Developing Mouse Brain, Mouse Brain
Calb2 ISH: Mus musculus, Male, P56, sagittal calbindin 2, entrez_id: 12308, Experiment: 75492322, C57BL/6J Studies: Developing Mouse Brain, Mouse Brain
Tfdp1 ISH: Mus musculus, Male, P56, sagittal transcription factor Dp 1, entrez_id: 21781, Experiment: 69290668, C57BL/6J Studies: Developing Mouse Brain, Mouse Brain
Six4 ISH: Mus musculus, Male, P56, sagittal sine oculis-related homeobox 4, entrez_id: 20474, Experiment: 70593347, C57BL/6J Studies: Developing Mouse Brain, Mouse Brain
Plp1 ISH: Mus musculus, Male, P56, sagittal Plp1, Experiment: 2490, C57BL/6J Studies: Developing Mouse Brain, Mouse Brain
Meis1 ISH: Mus musculus, Male, P56, sagittal Meis homeobox 1, entrez_id: 17268, Experiment: 323848, C57BL/6J Studies: Developing Mouse Brain, Mouse Brain
Cst3 ISH: Mus musculus, Male, P56, sagittal cystatin C, entrez_id: 13010, Experiment: 75457611, C57BL/6J Studies: Developing Mouse Brain, Mouse Brain
Ucn ISH: Mus musculus, Male, P56, coronal Ucn, Experiment: 1434, C57BL/6J, Failed QC Studies: Developing Mouse Brain, Mouse Brain
Tmem196 ISH: Mus musculus, Male, P56, sagittal transmembrane protein 196, entrez_id: 217951, Experiment: 70295745, C57BL/6J Studies: Developing Mouse Brain, Mouse Brain
Avpr1b ISH: Mus musculus, Male, P56, sagittal Avpr1b, Experiment: 308056097, C57BL/6J Studies: Developing Mouse Brain, Mouse Brain
Chrm3 ISH: Mus musculus, Male, P56, coronal "cholinergic receptor, muscarinic 3, cardiac", entrez_id: 12671, Experiment: 79912556, C57BL/6J Studies: Developing Mouse Brain, Mouse Brain
Tfap2b ISH: Mus musculus, Male, P56, sagittal transcription factor AP-2 beta, entrez_id: 21419, Experiment: 70598361, C57BL/6J Studies: Developing Mouse Brain, Mouse Brain
Sgcd ISH: Mus musculus, Male, P56, coronal "sarcoglycan, delta (dystrophin-associated glycoprotein)", entrez_id: 24052, Experiment: 71717142, C57BL/6J Studies: Developing Mouse Brain, Mouse Brain
Wif1 ISH: Mus musculus, Male, P56, sagittal Wnt inhibitory factor 1, entrez_id: 24117, Experiment: 79749606, C57BL/6J Studies: Developing Mouse Brain, Mouse Brain
Dner ISH: Mus musculus, Male, P56, coronal Dner, Experiment: 1699, C57BL/6J Studies: Developing Mouse Brain, Mouse Brain
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Npy2r ISH: Mus musculus, Male, P56, sagittal

neuropeptide Y receptor Y2, entrez_id: 18167, Experiment: 69258196, C57BL/6J

Studies: Developing Mouse Brain, Mouse Brain

C4b ISH: Mus musculus, Male, P56, coronal

complement component 4B (Chido blood group), entrez_id: 12268, Experiment: 74047758, C57BL/6J

Studies: Developing Mouse Brain, Mouse Brain

Lrp5 ISH: Mus musculus, Male, P56, sagittal

Lrp5, Experiment: 654, C57BL/6J, Failed QC

Studies: Developing Mouse Brain, Mouse Brain

Ptf1a ISH: Mus musculus, Male, P56, sagittal

"pancreas specific transcription factor, 1a", entrez_id: 19213, Experiment: 81657673, C57BL/6J

Studies: Developing Mouse Brain, Mouse Brain

Cdh9 ISH: Mus musculus, Male, P56, coronal

cadherin 9, entrez_id: 12565, Experiment: 72472764, C57BL/6J

Studies: Developing Mouse Brain, Mouse Brain

Lmo2 ISH: Mus musculus, Male, P56, sagittal

Lmo2, Experiment: 2384, C57BL/6J

Studies: Developing Mouse Brain, Mouse Brain

Calb2 ISH: Mus musculus, Male, P56, sagittal

calbindin 2, entrez_id: 12308, Experiment: 75492322, C57BL/6J

Studies: Developing Mouse Brain, Mouse Brain

Tfdp1 ISH: Mus musculus, Male, P56, sagittal

transcription factor Dp 1, entrez_id: 21781, Experiment: 69290668, C57BL/6J

Studies: Developing Mouse Brain, Mouse Brain

Six4 ISH: Mus musculus, Male, P56, sagittal

sine oculis-related homeobox 4, entrez_id: 20474, Experiment: 70593347, C57BL/6J

Studies: Developing Mouse Brain, Mouse Brain

Plp1 ISH: Mus musculus, Male, P56, sagittal

Plp1, Experiment: 2490, C57BL/6J

Studies: Developing Mouse Brain, Mouse Brain

Meis1 ISH: Mus musculus, Male, P56, sagittal

Meis homeobox 1, entrez_id: 17268, Experiment: 323848, C57BL/6J

Studies: Developing Mouse Brain, Mouse Brain

Cst3 ISH: Mus musculus, Male, P56, sagittal

cystatin C, entrez_id: 13010, Experiment: 75457611, C57BL/6J

Studies: Developing Mouse Brain, Mouse Brain

Ucn ISH: Mus musculus, Male, P56, coronal

Ucn, Experiment: 1434, C57BL/6J, Failed QC

Studies: Developing Mouse Brain, Mouse Brain

Tmem196 ISH: Mus musculus, Male, P56, sagittal

transmembrane protein 196, entrez_id: 217951, Experiment: 70295745, C57BL/6J

Studies: Developing Mouse Brain, Mouse Brain

Avpr1b ISH: Mus musculus, Male, P56, sagittal

Avpr1b, Experiment: 308056097, C57BL/6J

Studies: Developing Mouse Brain, Mouse Brain

Chrm3 ISH: Mus musculus, Male, P56, coronal

"cholinergic receptor, muscarinic 3, cardiac", entrez_id: 12671, Experiment: 79912556, C57BL/6J

Studies: Developing Mouse Brain, Mouse Brain

Tfap2b ISH: Mus musculus, Male, P56, sagittal

transcription factor AP-2 beta, entrez_id: 21419, Experiment: 70598361, C57BL/6J

Studies: Developing Mouse Brain, Mouse Brain

Sgcd ISH: Mus musculus, Male, P56, coronal

"sarcoglycan, delta (dystrophin-associated glycoprotein)", entrez_id: 24052, Experiment: 71717142, C57BL/6J

Studies: Developing Mouse Brain, Mouse Brain

Wif1 ISH: Mus musculus, Male, P56, sagittal

Wnt inhibitory factor 1, entrez_id: 24117, Experiment: 79749606, C57BL/6J

Studies: Developing Mouse Brain, Mouse Brain

Dner ISH: Mus musculus, Male, P56, coronal

Dner, Experiment: 1699, C57BL/6J

Studies: Developing Mouse Brain, Mouse Brain

	Prenatal (9896)
	Juvenile (57411)
	Adult (116514)
	Aged (32659)

	FISH (300)
	ISH (137378)
	Microarray (290)
	RNA Sequencing (26216)
	Resource (5)

	Aging Dementia TBI - ISH data (1570)
	Aging Dementia TBI - non-ISH data (109)
	Developing Human Brain ISH (3941)
	Developing Human Prenatal LMD Microarray (243)
	Developing Human Reference Data (163)
	Developing Human Transcriptome (285)
	Developing Mouse Brain (21463)
	Glioblastoma (20203)
	Human Brain ISH Autism Study (528)
	Human Brain ISH Cortex Study (6670)
	Human Brain ISH Neurotransmitter Study (11670)
	Human Brain ISH Schizophrenia Study (3378)
	Human Brain ISH SubCortex Study (462)
	Human Brain Microarray (88)
	Human Glioblastoma RNASeq (26085)
	Mouse Brain (28886)
	Mouse Brain Reference Data (1)
	Mouse Cell Types - transcriptomics data (112)
	Mouse Connectivity Projection (1)
	Mouse Connectivity Transgenic Characterization (1850)
	Mouse Spinal Cord (36698)
	Mouse Strains (1080)
	Non-Human Primate ISH (3057)
	Non-Human Primate Macrodissection Microarray (65)
	Non-Human Primate Microdissection Microarray (82)
	Non-Human Primate Molecular Map (133)
	Sleep (1727)

	129/SvJ (10)
	129S1/SvlmJ (124)
	B6.129 (374)
	B6.129.FVB (39)
	B6.C3H (17)
	B6.FVB (35)
	B6.FVB(ICR) (37)
	B6;CFW (2)
	B6;ICR (2)
	C57BL/6J (85098)
	CAST/EiJ (124)
	DBA/2J (124)
	FVB (23)
	FVB.CD1(ICR) (14)
	FVB/NJ (8)
	PWD/PhJ (93)
	SPRET/EiJ (124)
	WSB/EiJ (93)
	ai2/thcre (1)
	ctgf-cre (2)
	wfs1-creer (2)

	Asian (339)
	Black or African American (8233)
	European (122)
	Hispanic (4125)
	Two or more races (122)
	White or Caucasian (14290)

	Dorsal to Ventral (1096)
	Lateral to Medial (3332)
	Medial to Lateral (5219)
	Ventral to Dorsal (7134)
	coronal (27597)
	sagittal (43609)
	variable (38372)

	autism (258)
	control (26146)
	glioblastoma (32400)
	schizophrenia (1231)
	traumatic brain injury (762)

	Amygdala/Hippocampus (1914)
	Brain (1981)
	Brainstem (43)
	Cerebellum (43)
	Cingulate Cortex (2843)
	Claustrum/Insula (1229)
	Dorsolateral prefrontal cortex (3824)
	Frontal Cortex (4049)
	Parieto-Occipital Cortex (2201)
	Posterior Superior Temporal Cortex (37)
	SubCortex (1144)
	Temporal cortex (3392)
	Ventral Anterior Cingulate (20)
	Ventral striatum (788)
	Visual Cortex (802)
	Visual cortex (3303)
	amygdaloid complex (576)
	brain (173)
	frontal lobe (5823)
	hippocampal cortex (hippocampal formation) (579)
	hippocampus (hippocampal formation) (522)
	medial frontal cortex (areas 24 25 and 32) (576)
	medial prefrontal cortex (715)
	occipital cortex (576)
	occipital lobe (955)
	parietal lobe (7171)
	parietal neocortex (498)
	temporal lobe (5774)
	temporal neocortex (550)
	ventral striatum (576)

	Human (74689)
	Mouse (87459)
	NHP (3204)

	Female (44466)
	Male (141492)

	Passed QC (160928)
	Failed QC (4424)