Allen Brain Atlas

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Ngef ISH: Mus musculus, Male, P56, coronal neuronal guanine nucleotide exchange factor, entrez_id: 53972, Experiment: 72119591, C57BL/6J Studies: Developing Mouse Brain, Mouse Brain
Acvr1c ISH: Mus musculus, Male, P56, coronal "activin A receptor, type IC", entrez_id: 269275, Experiment: 71250307, C57BL/6J Studies: Developing Mouse Brain, Mouse Brain
Pcdh20 ISH: Mus musculus, Male, P56, coronal protocadherin 20, entrez_id: 219257, Experiment: 71670738, C57BL/6J Studies: Developing Mouse Brain, Mouse Brain
Atf2 ISH: Mus musculus, Male, P56, sagittal activating transcription factor 2, entrez_id: 11909, Experiment: 68845807, C57BL/6J Studies: Developing Mouse Brain, Mouse Brain
Prnp ISH: Mus musculus, Male, P56, coronal Prnp, Experiment: 1405, C57BL/6J Studies: Developing Mouse Brain, Mouse Brain
Adcy2 ISH: Mus musculus, Male, P56, coronal Adcy2, Experiment: 73, C57BL/6J Studies: Developing Mouse Brain, Mouse Brain
Apba1 ISH: Mus musculus, Male, P56, sagittal "amyloid beta (A4) precursor protein binding, family A, member 1", entrez_id: 319924, Experiment: 69526713, C57BL/6J Studies: Developing Mouse Brain, Mouse Brain
Cdh2 ISH: Mus musculus, Male, P56, sagittal cadherin 2, entrez_id: 12558, Experiment: 71610800, C57BL/6J, Failed QC Studies: Developing Mouse Brain, Mouse Brain
Abhd4 ISH: Mus musculus, Male, P56, sagittal abhydrolase domain containing 4, entrez_id: 105501, Experiment: 638713, C57BL/6J Studies: Developing Mouse Brain, Mouse Brain
Maob ISH: Mus musculus, Male, P56, sagittal monoamine oxidase B, entrez_id: 109731, Experiment: 69736456, C57BL/6J Studies: Developing Mouse Brain, Mouse Brain
Letmd1 ISH: Mus musculus, Male, P56, coronal Letmd1, Experiment: 1635, C57BL/6J Studies: Developing Mouse Brain, Mouse Brain
Axin2 ISH: Mus musculus, Male, P56, coronal axin2, entrez_id: 12006, Experiment: 74819487, C57BL/6J Studies: Developing Mouse Brain, Mouse Brain
Cdh18 ISH: Mus musculus, Male, P56, sagittal cadherin 18, entrez_id: 320865, Experiment: 70611407, C57BL/6J Studies: Developing Mouse Brain, Mouse Brain
Bcl2 ISH: Mus musculus, Male, P56, sagittal B cell leukemia/lymphoma 2, entrez_id: 12043, Experiment: 69529274, C57BL/6J Studies: Developing Mouse Brain, Mouse Brain
Csnk1d ISH: Mus musculus, Male, P56, sagittal "casein kinase 1, delta", entrez_id: 104318, Experiment: 545091, C57BL/6J, Failed QC Studies: Developing Mouse Brain, Mouse Brain
Tbx2 ISH: Mus musculus, Male, P56, sagittal T-box 2, entrez_id: 21385, Experiment: 70593396, C57BL/6J Studies: Developing Mouse Brain, Mouse Brain
Rcor2 ISH: Mus musculus, Male, P56, sagittal REST corepressor 2, entrez_id: 104383, Experiment: 69261922, C57BL/6J Studies: Developing Mouse Brain, Mouse Brain
Tnnt1 ISH: Mus musculus, Male, P56, sagittal "troponin T1, skeletal, slow", entrez_id: 21955, Experiment: 74821765, C57BL/6J Studies: Developing Mouse Brain, Mouse Brain
Zfp36l1 ISH: Mus musculus, Male, P56, sagittal "zinc finger protein 36, C3H type-like 1", entrez_id: 12192, Experiment: 70445341, C57BL/6J Studies: Developing Mouse Brain, Mouse Brain
Slc6a4 ISH: Mus musculus, Male, P56, coronal "solute carrier family 6 (neurotransmitter transporter, serotonin), member 4", entrez_id: 15567, Experiment: 79591679, C57BL/6J Studies: Developing Mouse Brain, Mouse Brain
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Ngef ISH: Mus musculus, Male, P56, coronal

neuronal guanine nucleotide exchange factor, entrez_id: 53972, Experiment: 72119591, C57BL/6J

Studies: Developing Mouse Brain, Mouse Brain

Acvr1c ISH: Mus musculus, Male, P56, coronal

"activin A receptor, type IC", entrez_id: 269275, Experiment: 71250307, C57BL/6J

Studies: Developing Mouse Brain, Mouse Brain

Pcdh20 ISH: Mus musculus, Male, P56, coronal

protocadherin 20, entrez_id: 219257, Experiment: 71670738, C57BL/6J

Studies: Developing Mouse Brain, Mouse Brain

Atf2 ISH: Mus musculus, Male, P56, sagittal

activating transcription factor 2, entrez_id: 11909, Experiment: 68845807, C57BL/6J

Studies: Developing Mouse Brain, Mouse Brain

Prnp ISH: Mus musculus, Male, P56, coronal

Prnp, Experiment: 1405, C57BL/6J

Studies: Developing Mouse Brain, Mouse Brain

Adcy2 ISH: Mus musculus, Male, P56, coronal

Adcy2, Experiment: 73, C57BL/6J

Studies: Developing Mouse Brain, Mouse Brain

Apba1 ISH: Mus musculus, Male, P56, sagittal

"amyloid beta (A4) precursor protein binding, family A, member 1", entrez_id: 319924, Experiment: 69526713, C57BL/6J

Studies: Developing Mouse Brain, Mouse Brain

Cdh2 ISH: Mus musculus, Male, P56, sagittal

cadherin 2, entrez_id: 12558, Experiment: 71610800, C57BL/6J, Failed QC

Studies: Developing Mouse Brain, Mouse Brain

Abhd4 ISH: Mus musculus, Male, P56, sagittal

abhydrolase domain containing 4, entrez_id: 105501, Experiment: 638713, C57BL/6J

Studies: Developing Mouse Brain, Mouse Brain

Maob ISH: Mus musculus, Male, P56, sagittal

monoamine oxidase B, entrez_id: 109731, Experiment: 69736456, C57BL/6J

Studies: Developing Mouse Brain, Mouse Brain

Letmd1 ISH: Mus musculus, Male, P56, coronal

Letmd1, Experiment: 1635, C57BL/6J

Studies: Developing Mouse Brain, Mouse Brain

Axin2 ISH: Mus musculus, Male, P56, coronal

axin2, entrez_id: 12006, Experiment: 74819487, C57BL/6J

Studies: Developing Mouse Brain, Mouse Brain

Cdh18 ISH: Mus musculus, Male, P56, sagittal

cadherin 18, entrez_id: 320865, Experiment: 70611407, C57BL/6J

Studies: Developing Mouse Brain, Mouse Brain

Bcl2 ISH: Mus musculus, Male, P56, sagittal

B cell leukemia/lymphoma 2, entrez_id: 12043, Experiment: 69529274, C57BL/6J

Studies: Developing Mouse Brain, Mouse Brain

Csnk1d ISH: Mus musculus, Male, P56, sagittal

"casein kinase 1, delta", entrez_id: 104318, Experiment: 545091, C57BL/6J, Failed QC

Studies: Developing Mouse Brain, Mouse Brain

Tbx2 ISH: Mus musculus, Male, P56, sagittal

T-box 2, entrez_id: 21385, Experiment: 70593396, C57BL/6J

Studies: Developing Mouse Brain, Mouse Brain

Rcor2 ISH: Mus musculus, Male, P56, sagittal

REST corepressor 2, entrez_id: 104383, Experiment: 69261922, C57BL/6J

Studies: Developing Mouse Brain, Mouse Brain

Tnnt1 ISH: Mus musculus, Male, P56, sagittal

"troponin T1, skeletal, slow", entrez_id: 21955, Experiment: 74821765, C57BL/6J

Studies: Developing Mouse Brain, Mouse Brain

Zfp36l1 ISH: Mus musculus, Male, P56, sagittal

"zinc finger protein 36, C3H type-like 1", entrez_id: 12192, Experiment: 70445341, C57BL/6J

Studies: Developing Mouse Brain, Mouse Brain

Slc6a4 ISH: Mus musculus, Male, P56, coronal

"solute carrier family 6 (neurotransmitter transporter, serotonin), member 4", entrez_id: 15567, Experiment: 79591679, C57BL/6J

Studies: Developing Mouse Brain, Mouse Brain

	Prenatal (9896)
	Juvenile (57411)
	Adult (116514)
	Aged (32659)

	FISH (300)
	ISH (137378)
	Microarray (290)
	RNA Sequencing (26216)
	Resource (5)

	Aging Dementia TBI - ISH data (1570)
	Aging Dementia TBI - non-ISH data (109)
	Developing Human Brain ISH (3941)
	Developing Human Prenatal LMD Microarray (243)
	Developing Human Reference Data (163)
	Developing Human Transcriptome (285)
	Developing Mouse Brain (21463)
	Glioblastoma (20203)
	Human Brain ISH Autism Study (528)
	Human Brain ISH Cortex Study (6670)
	Human Brain ISH Neurotransmitter Study (11670)
	Human Brain ISH Schizophrenia Study (3378)
	Human Brain ISH SubCortex Study (462)
	Human Brain Microarray (88)
	Human Glioblastoma RNASeq (26085)
	Mouse Brain (28886)
	Mouse Brain Reference Data (1)
	Mouse Cell Types - transcriptomics data (112)
	Mouse Connectivity Projection (1)
	Mouse Connectivity Transgenic Characterization (1850)
	Mouse Spinal Cord (36698)
	Mouse Strains (1080)
	Non-Human Primate ISH (3057)
	Non-Human Primate Macrodissection Microarray (65)
	Non-Human Primate Microdissection Microarray (82)
	Non-Human Primate Molecular Map (133)
	Sleep (1727)

	129/SvJ (10)
	129S1/SvlmJ (124)
	B6.129 (374)
	B6.129.FVB (39)
	B6.C3H (17)
	B6.FVB (35)
	B6.FVB(ICR) (37)
	B6;CFW (2)
	B6;ICR (2)
	C57BL/6J (85098)
	CAST/EiJ (124)
	DBA/2J (124)
	FVB (23)
	FVB.CD1(ICR) (14)
	FVB/NJ (8)
	PWD/PhJ (93)
	SPRET/EiJ (124)
	WSB/EiJ (93)
	ai2/thcre (1)
	ctgf-cre (2)
	wfs1-creer (2)

	Asian (339)
	Black or African American (8233)
	European (122)
	Hispanic (4125)
	Two or more races (122)
	White or Caucasian (14290)

	Dorsal to Ventral (1096)
	Lateral to Medial (3332)
	Medial to Lateral (5219)
	Ventral to Dorsal (7134)
	coronal (27597)
	sagittal (43609)
	variable (38372)

	autism (258)
	control (26146)
	glioblastoma (32400)
	schizophrenia (1231)
	traumatic brain injury (762)

	Amygdala/Hippocampus (1914)
	Brain (1981)
	Brainstem (43)
	Cerebellum (43)
	Cingulate Cortex (2843)
	Claustrum/Insula (1229)
	Dorsolateral prefrontal cortex (3824)
	Frontal Cortex (4049)
	Parieto-Occipital Cortex (2201)
	Posterior Superior Temporal Cortex (37)
	SubCortex (1144)
	Temporal cortex (3392)
	Ventral Anterior Cingulate (20)
	Ventral striatum (788)
	Visual Cortex (802)
	Visual cortex (3303)
	amygdaloid complex (576)
	brain (173)
	frontal lobe (5823)
	hippocampal cortex (hippocampal formation) (579)
	hippocampus (hippocampal formation) (522)
	medial frontal cortex (areas 24 25 and 32) (576)
	medial prefrontal cortex (715)
	occipital cortex (576)
	occipital lobe (955)
	parietal lobe (7171)
	parietal neocortex (498)
	temporal lobe (5774)
	temporal neocortex (550)
	ventral striatum (576)

	Human (74689)
	Mouse (87459)
	NHP (3204)

	Female (44466)
	Male (141492)

	Passed QC (160928)
	Failed QC (4424)