Allen Brain Atlas

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Igf1 ISH: Mus musculus, Male, P56, sagittal insulin-like growth factor 1, entrez_id: 16000, Experiment: 75197528, C57BL/6J Studies: Developing Mouse Brain, Mouse Brain
Clcn5 ISH: Mus musculus, Male, P56, sagittal chloride channel 5, entrez_id: 12728, Experiment: 275681, C57BL/6J, Failed QC Studies: Developing Mouse Brain, Mouse Brain
Plxnb1 ISH: Mus musculus, Male, P56, coronal Plxnb1, Experiment: 1561, C57BL/6J Studies: Developing Mouse Brain, Mouse Brain
Jazf1 ISH: Mus musculus, Male, P56, sagittal JAZF zinc finger 1, entrez_id: 231986, Experiment: 69113931, C57BL/6J Studies: Developing Mouse Brain, Mouse Brain
Efnb2 ISH: Mus musculus, Male, P56, sagittal ephrin B2, entrez_id: 13642, Experiment: 79903764, C57BL/6J Studies: Developing Mouse Brain, Mouse Brain
Pcgf6 ISH: Mus musculus, Male, P56, coronal polycomb group ring finger 6, entrez_id: 71041, Experiment: 70634297, C57BL/6J Studies: Developing Mouse Brain, Mouse Brain
Plp1 ISH: Mus musculus, Male, P56, sagittal proteolipid protein (myelin) 1, entrez_id: 18823, Experiment: 75457515, C57BL/6J Studies: Developing Mouse Brain, Mouse Brain
Fmo1 ISH: Mus musculus, Male, P56, sagittal flavin containing monooxygenase 1, entrez_id: 14261, Experiment: 68302311, C57BL/6J Studies: Developing Mouse Brain, Mouse Brain
Gad1 ISH: Mus musculus, Male, P56, sagittal glutamate decarboxylase 1, entrez_id: 14415, Experiment: 69117383, C57BL/6J Studies: Developing Mouse Brain, Mouse Brain
Rxfp1 ISH: Mus musculus, Male, P56, sagittal relaxin/insulin-like family peptide receptor 1, entrez_id: 381489, Experiment: 79762216, C57BL/6J Studies: Developing Mouse Brain, Mouse Brain
Hivep2 ISH: Mus musculus, Male, P56, sagittal human immunodeficiency virus type I enhancer binding protein 2, entrez_id: 15273, Experiment: 70795922, C57BL/6J Studies: Developing Mouse Brain, Mouse Brain
Cebpa ISH: Mus musculus, Male, P56, sagittal "CCAAT/enhancer binding protein (C/EBP), alpha", entrez_id: 12606, Experiment: 68302029, C57BL/6J, Failed QC Studies: Developing Mouse Brain, Mouse Brain
Frzb ISH: Mus musculus, Male, P56, sagittal frizzled-related protein, entrez_id: 20378, Experiment: 69117384, C57BL/6J, Failed QC Studies: Developing Mouse Brain, Mouse Brain
Prss12 ISH: Mus musculus, Male, P56, sagittal "protease, serine 12 neurotrypsin (motopsin)", entrez_id: 19142, Experiment: 68631869, C57BL/6J Studies: Developing Mouse Brain, Mouse Brain
Barhl2 ISH: Mus musculus, Male, P56, sagittal BarH-like 2 (Drosophila), entrez_id: 104382, Experiment: 73497128, C57BL/6J Studies: Developing Mouse Brain, Mouse Brain
Foxk1 ISH: Mus musculus, Male, P56, sagittal forkhead box K1, entrez_id: 17425, Experiment: 73497147, C57BL/6J Studies: Developing Mouse Brain, Mouse Brain
Plcxd2 ISH: Mus musculus, Male, P56, coronal "phosphatidylinositol-specific phospholipase C, X domain containing 2", entrez_id: 433022, Experiment: 79591579, C57BL/6J Studies: Developing Mouse Brain, Mouse Brain
Pak1 ISH: Mus musculus, Male, P56, sagittal p21 protein (Cdc42/Rac)-activated kinase 1, entrez_id: 18479, Experiment: 69782682, C57BL/6J Studies: Developing Mouse Brain, Mouse Brain
Bmp7 ISH: Mus musculus, Male, P56, coronal Bmp7, Experiment: 2065, C57BL/6J Studies: Developing Mouse Brain, Mouse Brain
Alk ISH: Mus musculus, Male, P56, sagittal anaplastic lymphoma kinase, entrez_id: 11682, Experiment: 73818805, C57BL/6J, Failed QC Studies: Developing Mouse Brain, Mouse Brain
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Igf1 ISH: Mus musculus, Male, P56, sagittal

insulin-like growth factor 1, entrez_id: 16000, Experiment: 75197528, C57BL/6J

Studies: Developing Mouse Brain, Mouse Brain

Clcn5 ISH: Mus musculus, Male, P56, sagittal

chloride channel 5, entrez_id: 12728, Experiment: 275681, C57BL/6J, Failed QC

Studies: Developing Mouse Brain, Mouse Brain

Plxnb1 ISH: Mus musculus, Male, P56, coronal

Plxnb1, Experiment: 1561, C57BL/6J

Studies: Developing Mouse Brain, Mouse Brain

Jazf1 ISH: Mus musculus, Male, P56, sagittal

JAZF zinc finger 1, entrez_id: 231986, Experiment: 69113931, C57BL/6J

Studies: Developing Mouse Brain, Mouse Brain

Efnb2 ISH: Mus musculus, Male, P56, sagittal

ephrin B2, entrez_id: 13642, Experiment: 79903764, C57BL/6J

Studies: Developing Mouse Brain, Mouse Brain

Pcgf6 ISH: Mus musculus, Male, P56, coronal

polycomb group ring finger 6, entrez_id: 71041, Experiment: 70634297, C57BL/6J

Studies: Developing Mouse Brain, Mouse Brain

Plp1 ISH: Mus musculus, Male, P56, sagittal

proteolipid protein (myelin) 1, entrez_id: 18823, Experiment: 75457515, C57BL/6J

Studies: Developing Mouse Brain, Mouse Brain

Fmo1 ISH: Mus musculus, Male, P56, sagittal

flavin containing monooxygenase 1, entrez_id: 14261, Experiment: 68302311, C57BL/6J

Studies: Developing Mouse Brain, Mouse Brain

Gad1 ISH: Mus musculus, Male, P56, sagittal

glutamate decarboxylase 1, entrez_id: 14415, Experiment: 69117383, C57BL/6J

Studies: Developing Mouse Brain, Mouse Brain

Rxfp1 ISH: Mus musculus, Male, P56, sagittal

relaxin/insulin-like family peptide receptor 1, entrez_id: 381489, Experiment: 79762216, C57BL/6J

Studies: Developing Mouse Brain, Mouse Brain

Hivep2 ISH: Mus musculus, Male, P56, sagittal

human immunodeficiency virus type I enhancer binding protein 2, entrez_id: 15273, Experiment: 70795922, C57BL/6J

Studies: Developing Mouse Brain, Mouse Brain

Cebpa ISH: Mus musculus, Male, P56, sagittal

"CCAAT/enhancer binding protein (C/EBP), alpha", entrez_id: 12606, Experiment: 68302029, C57BL/6J, Failed QC

Studies: Developing Mouse Brain, Mouse Brain

Frzb ISH: Mus musculus, Male, P56, sagittal

frizzled-related protein, entrez_id: 20378, Experiment: 69117384, C57BL/6J, Failed QC

Studies: Developing Mouse Brain, Mouse Brain

Prss12 ISH: Mus musculus, Male, P56, sagittal

"protease, serine 12 neurotrypsin (motopsin)", entrez_id: 19142, Experiment: 68631869, C57BL/6J

Studies: Developing Mouse Brain, Mouse Brain

Barhl2 ISH: Mus musculus, Male, P56, sagittal

BarH-like 2 (Drosophila), entrez_id: 104382, Experiment: 73497128, C57BL/6J

Studies: Developing Mouse Brain, Mouse Brain

Foxk1 ISH: Mus musculus, Male, P56, sagittal

forkhead box K1, entrez_id: 17425, Experiment: 73497147, C57BL/6J

Studies: Developing Mouse Brain, Mouse Brain

Plcxd2 ISH: Mus musculus, Male, P56, coronal

"phosphatidylinositol-specific phospholipase C, X domain containing 2", entrez_id: 433022, Experiment: 79591579, C57BL/6J

Studies: Developing Mouse Brain, Mouse Brain

Pak1 ISH: Mus musculus, Male, P56, sagittal

p21 protein (Cdc42/Rac)-activated kinase 1, entrez_id: 18479, Experiment: 69782682, C57BL/6J

Studies: Developing Mouse Brain, Mouse Brain

Bmp7 ISH: Mus musculus, Male, P56, coronal

Bmp7, Experiment: 2065, C57BL/6J

Studies: Developing Mouse Brain, Mouse Brain

Alk ISH: Mus musculus, Male, P56, sagittal

anaplastic lymphoma kinase, entrez_id: 11682, Experiment: 73818805, C57BL/6J, Failed QC

Studies: Developing Mouse Brain, Mouse Brain

	Prenatal (9896)
	Juvenile (57411)
	Adult (116514)
	Aged (32659)

	FISH (300)
	ISH (137378)
	Microarray (290)
	RNA Sequencing (26216)
	Resource (5)

	Aging Dementia TBI - ISH data (1570)
	Aging Dementia TBI - non-ISH data (109)
	Developing Human Brain ISH (3941)
	Developing Human Prenatal LMD Microarray (243)
	Developing Human Reference Data (163)
	Developing Human Transcriptome (285)
	Developing Mouse Brain (21463)
	Glioblastoma (20203)
	Human Brain ISH Autism Study (528)
	Human Brain ISH Cortex Study (6670)
	Human Brain ISH Neurotransmitter Study (11670)
	Human Brain ISH Schizophrenia Study (3378)
	Human Brain ISH SubCortex Study (462)
	Human Brain Microarray (88)
	Human Glioblastoma RNASeq (26085)
	Mouse Brain (28886)
	Mouse Brain Reference Data (1)
	Mouse Cell Types - transcriptomics data (112)
	Mouse Connectivity Projection (1)
	Mouse Connectivity Transgenic Characterization (1850)
	Mouse Spinal Cord (36698)
	Mouse Strains (1080)
	Non-Human Primate ISH (3057)
	Non-Human Primate Macrodissection Microarray (65)
	Non-Human Primate Microdissection Microarray (82)
	Non-Human Primate Molecular Map (133)
	Sleep (1727)

	129/SvJ (10)
	129S1/SvlmJ (124)
	B6.129 (374)
	B6.129.FVB (39)
	B6.C3H (17)
	B6.FVB (35)
	B6.FVB(ICR) (37)
	B6;CFW (2)
	B6;ICR (2)
	C57BL/6J (85098)
	CAST/EiJ (124)
	DBA/2J (124)
	FVB (23)
	FVB.CD1(ICR) (14)
	FVB/NJ (8)
	PWD/PhJ (93)
	SPRET/EiJ (124)
	WSB/EiJ (93)
	ai2/thcre (1)
	ctgf-cre (2)
	wfs1-creer (2)

	Asian (339)
	Black or African American (8233)
	European (122)
	Hispanic (4125)
	Two or more races (122)
	White or Caucasian (14290)

	Dorsal to Ventral (1096)
	Lateral to Medial (3332)
	Medial to Lateral (5219)
	Ventral to Dorsal (7134)
	coronal (27597)
	sagittal (43609)
	variable (38372)

	autism (258)
	control (26146)
	glioblastoma (32400)
	schizophrenia (1231)
	traumatic brain injury (762)

	Amygdala/Hippocampus (1914)
	Brain (1981)
	Brainstem (43)
	Cerebellum (43)
	Cingulate Cortex (2843)
	Claustrum/Insula (1229)
	Dorsolateral prefrontal cortex (3824)
	Frontal Cortex (4049)
	Parieto-Occipital Cortex (2201)
	Posterior Superior Temporal Cortex (37)
	SubCortex (1144)
	Temporal cortex (3392)
	Ventral Anterior Cingulate (20)
	Ventral striatum (788)
	Visual Cortex (802)
	Visual cortex (3303)
	amygdaloid complex (576)
	brain (173)
	frontal lobe (5823)
	hippocampal cortex (hippocampal formation) (579)
	hippocampus (hippocampal formation) (522)
	medial frontal cortex (areas 24 25 and 32) (576)
	medial prefrontal cortex (715)
	occipital cortex (576)
	occipital lobe (955)
	parietal lobe (7171)
	parietal neocortex (498)
	temporal lobe (5774)
	temporal neocortex (550)
	ventral striatum (576)

	Human (74689)
	Mouse (87459)
	NHP (3204)

	Female (44466)
	Male (141492)

	Passed QC (160928)
	Failed QC (4424)