Allen Brain Atlas

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Pou2f1 ISH: Mus musculus, Male, P56, sagittal Pou2f1, Experiment: 1564, C57BL/6J Studies: Developing Mouse Brain, Mouse Brain
Anxa4 ISH: Mus musculus, Male, P56, sagittal annexin A4, entrez_id: 11746, Experiment: 69014548, C57BL/6J Studies: Developing Mouse Brain, Mouse Brain
Gpr83 ISH: Mus musculus, Male, P56, coronal G protein-coupled receptor 83, entrez_id: 14608, Experiment: 72338696, C57BL/6J Studies: Developing Mouse Brain, Mouse Brain
Hmbox1 ISH: Mus musculus, Male, P56, sagittal homeobox containing 1, entrez_id: 219150, Experiment: 73949722, C57BL/6J Studies: Developing Mouse Brain, Mouse Brain
Plxna1 ISH: Mus musculus, Male, P56, sagittal plexin A1, entrez_id: 18844, Experiment: 69289721, C57BL/6J Studies: Developing Mouse Brain, Mouse Brain
Slc32a1 ISH: Mus musculus, Male, P56, sagittal "solute carrier family 32 (GABA vesicular transporter), member 1", entrez_id: 22348, Experiment: 79677349, C57BL/6J Studies: Developing Mouse Brain, Mouse Brain
Apoe ISH: Mus musculus, Male, P56, sagittal apolipoprotein E, entrez_id: 11816, Experiment: 77620395, C57BL/6J Studies: Developing Mouse Brain, Mouse Brain
Slc1a6 ISH: Mus musculus, Male, P56, sagittal "solute carrier family 1 (high affinity aspartate/glutamate transporter), member 6", entrez_id: 20513, Experiment: 69873845, C57BL/6J Studies: Developing Mouse Brain, Mouse Brain
Fgfr1 ISH: Mus musculus, Male, P56, coronal fibroblast growth factor receptor 1, entrez_id: 14182, Experiment: 79588290, C57BL/6J Studies: Developing Mouse Brain, Mouse Brain
Cdh9 ISH: Mus musculus, Male, P56, sagittal cadherin 9, entrez_id: 12565, Experiment: 70719650, C57BL/6J Studies: Developing Mouse Brain, Mouse Brain
Psd ISH: Mus musculus, Male, P56, sagittal pleckstrin and Sec7 domain containing, entrez_id: 73728, Experiment: 69352896, C57BL/6J Studies: Developing Mouse Brain, Mouse Brain
Fbxw4 ISH: Mus musculus, Male, P56, sagittal F-box and WD-40 domain protein 4, entrez_id: 30838, Experiment: 68441616, C57BL/6J Studies: Developing Mouse Brain, Mouse Brain
Col3a1 ISH: Mus musculus, Male, P56, sagittal "collagen, type III, alpha 1", entrez_id: 12825, Experiment: 70719653, C57BL/6J Studies: Developing Mouse Brain, Mouse Brain
Mbp ISH: Mus musculus, Male, P56, sagittal Mbp, Experiment: 1226, C57BL/6J, Failed QC Studies: Developing Mouse Brain, Mouse Brain
Sox10 ISH: Mus musculus, Male, P56, coronal SRY (sex determining region Y)-box 10, entrez_id: 20665, Experiment: 79556652, C57BL/6J Studies: Developing Mouse Brain, Mouse Brain
Synpr ISH: Mus musculus, Male, P56, sagittal synaptoporin, entrez_id: 72003, Experiment: 77454643, C57BL/6J Studies: Developing Mouse Brain, Mouse Brain
Arntl ISH: Mus musculus, Male, P56, coronal Arntl, Experiment: 116, C57BL/6J, Failed QC Studies: Developing Mouse Brain, Mouse Brain
Gad1 ISH: Mus musculus, Male, P56, sagittal glutamate decarboxylase 1, entrez_id: 14415, Experiment: 75492774, C57BL/6J Studies: Developing Mouse Brain, Mouse Brain
Fgf8 ISH: Mus musculus, Male, P56, sagittal fibroblast growth factor 8, entrez_id: 14179, Experiment: 68798561, C57BL/6J Studies: Developing Mouse Brain, Mouse Brain
Chrm4 ISH: Mus musculus, Male, P56, coronal Chrm4, Experiment: 259, C57BL/6J, Failed QC Studies: Developing Mouse Brain, Mouse Brain
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Pou2f1 ISH: Mus musculus, Male, P56, sagittal

Pou2f1, Experiment: 1564, C57BL/6J

Studies: Developing Mouse Brain, Mouse Brain

Anxa4 ISH: Mus musculus, Male, P56, sagittal

annexin A4, entrez_id: 11746, Experiment: 69014548, C57BL/6J

Studies: Developing Mouse Brain, Mouse Brain

Gpr83 ISH: Mus musculus, Male, P56, coronal

G protein-coupled receptor 83, entrez_id: 14608, Experiment: 72338696, C57BL/6J

Studies: Developing Mouse Brain, Mouse Brain

Hmbox1 ISH: Mus musculus, Male, P56, sagittal

homeobox containing 1, entrez_id: 219150, Experiment: 73949722, C57BL/6J

Studies: Developing Mouse Brain, Mouse Brain

Plxna1 ISH: Mus musculus, Male, P56, sagittal

plexin A1, entrez_id: 18844, Experiment: 69289721, C57BL/6J

Studies: Developing Mouse Brain, Mouse Brain

Slc32a1 ISH: Mus musculus, Male, P56, sagittal

"solute carrier family 32 (GABA vesicular transporter), member 1", entrez_id: 22348, Experiment: 79677349, C57BL/6J

Studies: Developing Mouse Brain, Mouse Brain

Apoe ISH: Mus musculus, Male, P56, sagittal

apolipoprotein E, entrez_id: 11816, Experiment: 77620395, C57BL/6J

Studies: Developing Mouse Brain, Mouse Brain

Slc1a6 ISH: Mus musculus, Male, P56, sagittal

"solute carrier family 1 (high affinity aspartate/glutamate transporter), member 6", entrez_id: 20513, Experiment: 69873845, C57BL/6J

Studies: Developing Mouse Brain, Mouse Brain

Fgfr1 ISH: Mus musculus, Male, P56, coronal

fibroblast growth factor receptor 1, entrez_id: 14182, Experiment: 79588290, C57BL/6J

Studies: Developing Mouse Brain, Mouse Brain

Cdh9 ISH: Mus musculus, Male, P56, sagittal

cadherin 9, entrez_id: 12565, Experiment: 70719650, C57BL/6J

Studies: Developing Mouse Brain, Mouse Brain

Psd ISH: Mus musculus, Male, P56, sagittal

pleckstrin and Sec7 domain containing, entrez_id: 73728, Experiment: 69352896, C57BL/6J

Studies: Developing Mouse Brain, Mouse Brain

Fbxw4 ISH: Mus musculus, Male, P56, sagittal

F-box and WD-40 domain protein 4, entrez_id: 30838, Experiment: 68441616, C57BL/6J

Studies: Developing Mouse Brain, Mouse Brain

Col3a1 ISH: Mus musculus, Male, P56, sagittal

"collagen, type III, alpha 1", entrez_id: 12825, Experiment: 70719653, C57BL/6J

Studies: Developing Mouse Brain, Mouse Brain

Mbp ISH: Mus musculus, Male, P56, sagittal

Mbp, Experiment: 1226, C57BL/6J, Failed QC

Studies: Developing Mouse Brain, Mouse Brain

Sox10 ISH: Mus musculus, Male, P56, coronal

SRY (sex determining region Y)-box 10, entrez_id: 20665, Experiment: 79556652, C57BL/6J

Studies: Developing Mouse Brain, Mouse Brain

Synpr ISH: Mus musculus, Male, P56, sagittal

synaptoporin, entrez_id: 72003, Experiment: 77454643, C57BL/6J

Studies: Developing Mouse Brain, Mouse Brain

Arntl ISH: Mus musculus, Male, P56, coronal

Arntl, Experiment: 116, C57BL/6J, Failed QC

Studies: Developing Mouse Brain, Mouse Brain

Gad1 ISH: Mus musculus, Male, P56, sagittal

glutamate decarboxylase 1, entrez_id: 14415, Experiment: 75492774, C57BL/6J

Studies: Developing Mouse Brain, Mouse Brain

Fgf8 ISH: Mus musculus, Male, P56, sagittal

fibroblast growth factor 8, entrez_id: 14179, Experiment: 68798561, C57BL/6J

Studies: Developing Mouse Brain, Mouse Brain

Chrm4 ISH: Mus musculus, Male, P56, coronal

Chrm4, Experiment: 259, C57BL/6J, Failed QC

Studies: Developing Mouse Brain, Mouse Brain

	Prenatal (9896)
	Juvenile (57411)
	Adult (116514)
	Aged (32659)

	FISH (300)
	ISH (137378)
	Microarray (290)
	RNA Sequencing (26216)
	Resource (5)

	Aging Dementia TBI - ISH data (1570)
	Aging Dementia TBI - non-ISH data (109)
	Developing Human Brain ISH (3941)
	Developing Human Prenatal LMD Microarray (243)
	Developing Human Reference Data (163)
	Developing Human Transcriptome (285)
	Developing Mouse Brain (21463)
	Glioblastoma (20203)
	Human Brain ISH Autism Study (528)
	Human Brain ISH Cortex Study (6670)
	Human Brain ISH Neurotransmitter Study (11670)
	Human Brain ISH Schizophrenia Study (3378)
	Human Brain ISH SubCortex Study (462)
	Human Brain Microarray (88)
	Human Glioblastoma RNASeq (26085)
	Mouse Brain (28886)
	Mouse Brain Reference Data (1)
	Mouse Cell Types - transcriptomics data (112)
	Mouse Connectivity Projection (1)
	Mouse Connectivity Transgenic Characterization (1850)
	Mouse Spinal Cord (36698)
	Mouse Strains (1080)
	Non-Human Primate ISH (3057)
	Non-Human Primate Macrodissection Microarray (65)
	Non-Human Primate Microdissection Microarray (82)
	Non-Human Primate Molecular Map (133)
	Sleep (1727)

	129/SvJ (10)
	129S1/SvlmJ (124)
	B6.129 (374)
	B6.129.FVB (39)
	B6.C3H (17)
	B6.FVB (35)
	B6.FVB(ICR) (37)
	B6;CFW (2)
	B6;ICR (2)
	C57BL/6J (85098)
	CAST/EiJ (124)
	DBA/2J (124)
	FVB (23)
	FVB.CD1(ICR) (14)
	FVB/NJ (8)
	PWD/PhJ (93)
	SPRET/EiJ (124)
	WSB/EiJ (93)
	ai2/thcre (1)
	ctgf-cre (2)
	wfs1-creer (2)

	Asian (339)
	Black or African American (8233)
	European (122)
	Hispanic (4125)
	Two or more races (122)
	White or Caucasian (14290)

	Dorsal to Ventral (1096)
	Lateral to Medial (3332)
	Medial to Lateral (5219)
	Ventral to Dorsal (7134)
	coronal (27597)
	sagittal (43609)
	variable (38372)

	autism (258)
	control (26146)
	glioblastoma (32400)
	schizophrenia (1231)
	traumatic brain injury (762)

	Amygdala/Hippocampus (1914)
	Brain (1981)
	Brainstem (43)
	Cerebellum (43)
	Cingulate Cortex (2843)
	Claustrum/Insula (1229)
	Dorsolateral prefrontal cortex (3824)
	Frontal Cortex (4049)
	Parieto-Occipital Cortex (2201)
	Posterior Superior Temporal Cortex (37)
	SubCortex (1144)
	Temporal cortex (3392)
	Ventral Anterior Cingulate (20)
	Ventral striatum (788)
	Visual Cortex (802)
	Visual cortex (3303)
	amygdaloid complex (576)
	brain (173)
	frontal lobe (5823)
	hippocampal cortex (hippocampal formation) (579)
	hippocampus (hippocampal formation) (522)
	medial frontal cortex (areas 24 25 and 32) (576)
	medial prefrontal cortex (715)
	occipital cortex (576)
	occipital lobe (955)
	parietal lobe (7171)
	parietal neocortex (498)
	temporal lobe (5774)
	temporal neocortex (550)
	ventral striatum (576)

	Human (74689)
	Mouse (87459)
	NHP (3204)

	Female (44466)
	Male (141492)

	Passed QC (160928)
	Failed QC (4424)