Allen Brain Atlas

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Gata2 ISH: Mus musculus, Male, P56, sagittal Gata2, Experiment: 486, C57BL/6J Studies: Developing Mouse Brain, Mouse Brain
Cttnbp2 ISH: Mus musculus, Male, P56, sagittal cortactin binding protein 2, entrez_id: 30785, Experiment: 70305634, C57BL/6J Studies: Developing Mouse Brain, Mouse Brain
Rgs4 ISH: Mus musculus, Male, P56, coronal Rgs4, Experiment: 1569, C57BL/6J Studies: Developing Mouse Brain, Mouse Brain
Igfbp3 ISH: Mus musculus, Male, P56, sagittal insulin-like growth factor binding protein 3, entrez_id: 16009, Experiment: 71764125, C57BL/6J, Failed QC Studies: Developing Mouse Brain, Mouse Brain
Marcksl1 ISH: Mus musculus, Male, P56, coronal Marcksl1, Experiment: 670, C57BL/6J Studies: Developing Mouse Brain, Mouse Brain
Ikzf5 ISH: Mus musculus, Male, P56, sagittal IKAROS family zinc finger 5, entrez_id: 67143, Experiment: 70609205, C57BL/6J Studies: Developing Mouse Brain, Mouse Brain
Ctnnb1 ISH: Mus musculus, Male, P56, coronal Ctnnb1, Experiment: 193, C57BL/6J, Failed QC Studies: Developing Mouse Brain, Mouse Brain
Mtf2 ISH: Mus musculus, Male, P56, sagittal Mtf2, Experiment: 1511, C57BL/6J Studies: Developing Mouse Brain, Mouse Brain
Mta1 ISH: Mus musculus, Male, P56, sagittal metastasis associated 1, entrez_id: 116870, Experiment: 71380423, C57BL/6J Studies: Developing Mouse Brain, Mouse Brain
Lhx1 ISH: Mus musculus, Male, P56, coronal Lhx1, Experiment: 633, C57BL/6J Studies: Developing Mouse Brain, Mouse Brain
Itgbl1 ISH: Mus musculus, Male, P56, sagittal "integrin, beta-like 1", entrez_id: 223272, Experiment: 70431409, C57BL/6J Studies: Developing Mouse Brain, Mouse Brain
Maoa ISH: Mus musculus, Male, P56, coronal monoamine oxidase A, entrez_id: 17161, Experiment: 74750015, C57BL/6J Studies: Developing Mouse Brain, Mouse Brain
Stat5a ISH: Mus musculus, Male, P56, sagittal signal transducer and activator of transcription 5A, entrez_id: 20850, Experiment: 76097719, C57BL/6J, Failed QC Studies: Developing Mouse Brain, Mouse Brain
Id2 ISH: Mus musculus, Male, P56, sagittal inhibitor of DNA binding 2, entrez_id: 15902, Experiment: 413825, C57BL/6J Studies: Developing Mouse Brain, Mouse Brain
Gnrh1 ISH: Mus musculus, Male, P56, sagittal gonadotropin releasing hormone 1, entrez_id: 14714, Experiment: 73712918, C57BL/6J Studies: Developing Mouse Brain, Mouse Brain
Drd3 ISH: Mus musculus, Male, P56, sagittal dopamine receptor D3, entrez_id: 13490, Experiment: 69237191, C57BL/6J, Failed QC Studies: Developing Mouse Brain, Mouse Brain
Sox2 ISH: Mus musculus, Male, P56, coronal SRY (sex determining region Y)-box 2, entrez_id: 20674, Experiment: 77280331, C57BL/6J Studies: Developing Mouse Brain, Mouse Brain
Coch ISH: Mus musculus, Male, P56, sagittal coagulation factor C homolog (Limulus polyphemus), entrez_id: 12810, Experiment: 70528533, C57BL/6J, Failed QC Studies: Developing Mouse Brain, Mouse Brain
Ets2 ISH: Mus musculus, Male, P56, coronal Ets2, Experiment: 406, C57BL/6J, Failed QC Studies: Developing Mouse Brain, Mouse Brain
Ednrb ISH: Mus musculus, Male, P56, coronal endothelin receptor type B, entrez_id: 13618, Experiment: 74750017, C57BL/6J Studies: Developing Mouse Brain, Mouse Brain
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Gata2 ISH: Mus musculus, Male, P56, sagittal

Gata2, Experiment: 486, C57BL/6J

Studies: Developing Mouse Brain, Mouse Brain

Cttnbp2 ISH: Mus musculus, Male, P56, sagittal

cortactin binding protein 2, entrez_id: 30785, Experiment: 70305634, C57BL/6J

Studies: Developing Mouse Brain, Mouse Brain

Rgs4 ISH: Mus musculus, Male, P56, coronal

Rgs4, Experiment: 1569, C57BL/6J

Studies: Developing Mouse Brain, Mouse Brain

Igfbp3 ISH: Mus musculus, Male, P56, sagittal

insulin-like growth factor binding protein 3, entrez_id: 16009, Experiment: 71764125, C57BL/6J, Failed QC

Studies: Developing Mouse Brain, Mouse Brain

Marcksl1 ISH: Mus musculus, Male, P56, coronal

Marcksl1, Experiment: 670, C57BL/6J

Studies: Developing Mouse Brain, Mouse Brain

Ikzf5 ISH: Mus musculus, Male, P56, sagittal

IKAROS family zinc finger 5, entrez_id: 67143, Experiment: 70609205, C57BL/6J

Studies: Developing Mouse Brain, Mouse Brain

Ctnnb1 ISH: Mus musculus, Male, P56, coronal

Ctnnb1, Experiment: 193, C57BL/6J, Failed QC

Studies: Developing Mouse Brain, Mouse Brain

Mtf2 ISH: Mus musculus, Male, P56, sagittal

Mtf2, Experiment: 1511, C57BL/6J

Studies: Developing Mouse Brain, Mouse Brain

Mta1 ISH: Mus musculus, Male, P56, sagittal

metastasis associated 1, entrez_id: 116870, Experiment: 71380423, C57BL/6J

Studies: Developing Mouse Brain, Mouse Brain

Lhx1 ISH: Mus musculus, Male, P56, coronal

Lhx1, Experiment: 633, C57BL/6J

Studies: Developing Mouse Brain, Mouse Brain

Itgbl1 ISH: Mus musculus, Male, P56, sagittal

"integrin, beta-like 1", entrez_id: 223272, Experiment: 70431409, C57BL/6J

Studies: Developing Mouse Brain, Mouse Brain

Maoa ISH: Mus musculus, Male, P56, coronal

monoamine oxidase A, entrez_id: 17161, Experiment: 74750015, C57BL/6J

Studies: Developing Mouse Brain, Mouse Brain

Stat5a ISH: Mus musculus, Male, P56, sagittal

signal transducer and activator of transcription 5A, entrez_id: 20850, Experiment: 76097719, C57BL/6J, Failed QC

Studies: Developing Mouse Brain, Mouse Brain

Id2 ISH: Mus musculus, Male, P56, sagittal

inhibitor of DNA binding 2, entrez_id: 15902, Experiment: 413825, C57BL/6J

Studies: Developing Mouse Brain, Mouse Brain

Gnrh1 ISH: Mus musculus, Male, P56, sagittal

gonadotropin releasing hormone 1, entrez_id: 14714, Experiment: 73712918, C57BL/6J

Studies: Developing Mouse Brain, Mouse Brain

Drd3 ISH: Mus musculus, Male, P56, sagittal

dopamine receptor D3, entrez_id: 13490, Experiment: 69237191, C57BL/6J, Failed QC

Studies: Developing Mouse Brain, Mouse Brain

Sox2 ISH: Mus musculus, Male, P56, coronal

SRY (sex determining region Y)-box 2, entrez_id: 20674, Experiment: 77280331, C57BL/6J

Studies: Developing Mouse Brain, Mouse Brain

Coch ISH: Mus musculus, Male, P56, sagittal

coagulation factor C homolog (Limulus polyphemus), entrez_id: 12810, Experiment: 70528533, C57BL/6J, Failed QC

Studies: Developing Mouse Brain, Mouse Brain

Ets2 ISH: Mus musculus, Male, P56, coronal

Ets2, Experiment: 406, C57BL/6J, Failed QC

Studies: Developing Mouse Brain, Mouse Brain

Ednrb ISH: Mus musculus, Male, P56, coronal

endothelin receptor type B, entrez_id: 13618, Experiment: 74750017, C57BL/6J

Studies: Developing Mouse Brain, Mouse Brain

	Prenatal (9896)
	Juvenile (57411)
	Adult (116514)
	Aged (32659)

	FISH (300)
	ISH (137378)
	Microarray (290)
	RNA Sequencing (26216)
	Resource (5)

	Aging Dementia TBI - ISH data (1570)
	Aging Dementia TBI - non-ISH data (109)
	Developing Human Brain ISH (3941)
	Developing Human Prenatal LMD Microarray (243)
	Developing Human Reference Data (163)
	Developing Human Transcriptome (285)
	Developing Mouse Brain (21463)
	Glioblastoma (20203)
	Human Brain ISH Autism Study (528)
	Human Brain ISH Cortex Study (6670)
	Human Brain ISH Neurotransmitter Study (11670)
	Human Brain ISH Schizophrenia Study (3378)
	Human Brain ISH SubCortex Study (462)
	Human Brain Microarray (88)
	Human Glioblastoma RNASeq (26085)
	Mouse Brain (28886)
	Mouse Brain Reference Data (1)
	Mouse Cell Types - transcriptomics data (112)
	Mouse Connectivity Projection (1)
	Mouse Connectivity Transgenic Characterization (1850)
	Mouse Spinal Cord (36698)
	Mouse Strains (1080)
	Non-Human Primate ISH (3057)
	Non-Human Primate Macrodissection Microarray (65)
	Non-Human Primate Microdissection Microarray (82)
	Non-Human Primate Molecular Map (133)
	Sleep (1727)

	129/SvJ (10)
	129S1/SvlmJ (124)
	B6.129 (374)
	B6.129.FVB (39)
	B6.C3H (17)
	B6.FVB (35)
	B6.FVB(ICR) (37)
	B6;CFW (2)
	B6;ICR (2)
	C57BL/6J (85098)
	CAST/EiJ (124)
	DBA/2J (124)
	FVB (23)
	FVB.CD1(ICR) (14)
	FVB/NJ (8)
	PWD/PhJ (93)
	SPRET/EiJ (124)
	WSB/EiJ (93)
	ai2/thcre (1)
	ctgf-cre (2)
	wfs1-creer (2)

	Asian (339)
	Black or African American (8233)
	European (122)
	Hispanic (4125)
	Two or more races (122)
	White or Caucasian (14290)

	Dorsal to Ventral (1096)
	Lateral to Medial (3332)
	Medial to Lateral (5219)
	Ventral to Dorsal (7134)
	coronal (27597)
	sagittal (43609)
	variable (38372)

	autism (258)
	control (26146)
	glioblastoma (32400)
	schizophrenia (1231)
	traumatic brain injury (762)

	Amygdala/Hippocampus (1914)
	Brain (1981)
	Brainstem (43)
	Cerebellum (43)
	Cingulate Cortex (2843)
	Claustrum/Insula (1229)
	Dorsolateral prefrontal cortex (3824)
	Frontal Cortex (4049)
	Parieto-Occipital Cortex (2201)
	Posterior Superior Temporal Cortex (37)
	SubCortex (1144)
	Temporal cortex (3392)
	Ventral Anterior Cingulate (20)
	Ventral striatum (788)
	Visual Cortex (802)
	Visual cortex (3303)
	amygdaloid complex (576)
	brain (173)
	frontal lobe (5823)
	hippocampal cortex (hippocampal formation) (579)
	hippocampus (hippocampal formation) (522)
	medial frontal cortex (areas 24 25 and 32) (576)
	medial prefrontal cortex (715)
	occipital cortex (576)
	occipital lobe (955)
	parietal lobe (7171)
	parietal neocortex (498)
	temporal lobe (5774)
	temporal neocortex (550)
	ventral striatum (576)

	Human (74689)
	Mouse (87459)
	NHP (3204)

	Female (44466)
	Male (141492)

	Passed QC (160928)
	Failed QC (4424)